Gene : Bradi1g58250 B. distachyon v3.1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Genomic Order:  7342
Name:  ? Bradi1g58250 Secondary Identifier:  ? PAC:32792105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58250 0.5kb upstream 0.5kb upstream 4629 true Bd1: 57289325-57293953 Brachypodium distachyon
Bradi1g58250 0.5kb upstream 0.5kb upstream 500 false Bd1: 57293454-57293953 Brachypodium distachyon
Bradi1g58250 0.5kb downstream 0.5kb downstream 4629 true Bd1: 57288825-57293453 Brachypodium distachyon
Bradi1g58250 0.5kb downstream 0.5kb downstream 500 false Bd1: 57288825-57289324 Brachypodium distachyon
Bradi1g58250 1.0kb upstream 1.0kb upstream 5129 true Bd1: 57289325-57294453 Brachypodium distachyon
Bradi1g58250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57293454-57294453 Brachypodium distachyon
Bradi1g58250 1.0kb downstream 1.0kb downstream 5129 true Bd1: 57288325-57293453 Brachypodium distachyon
Bradi1g58250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57288325-57289324 Brachypodium distachyon
Bradi1g58250 2.0kb upstream 2.0kb upstream 6129 true Bd1: 57289325-57295453 Brachypodium distachyon
Bradi1g58250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57293454-57295453 Brachypodium distachyon
Bradi1g58250 2.0kb downstream 2.0kb downstream 6129 true Bd1: 57287325-57293453 Brachypodium distachyon
Bradi1g58250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57287325-57289324 Brachypodium distachyon
Bradi1g58250 5.0kb upstream 5.0kb upstream 9129 true Bd1: 57289325-57298453 Brachypodium distachyon
Bradi1g58250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57293454-57298453 Brachypodium distachyon
Bradi1g58250 5.0kb downstream 5.0kb downstream 9129 true Bd1: 57284325-57293453 Brachypodium distachyon
Bradi1g58250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57284325-57289324 Brachypodium distachyon
Bradi1g58250 10.0kb upstream 10.0kb upstream 14129 true Bd1: 57289325-57303453 Brachypodium distachyon
Bradi1g58250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57293454-57303453 Brachypodium distachyon
Bradi1g58250 10.0kb downstream 10.0kb downstream 14129 true Bd1: 57279325-57293453 Brachypodium distachyon
Bradi1g58250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57279325-57289324 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571216 5269 Grass View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.583        
cufflinks 0.969        
cufflinks 0.976        
cufflinks 0.844        
cufflinks 0.499       Low
cufflinks 0.98        
cufflinks 0.976        
cufflinks 0.905        
cufflinks 0.904        
cufflinks 0.616        
cufflinks 0.838        
cufflinks 0.908        
cufflinks 0.724        
cufflinks 0.685        
cufflinks 0.593        
cufflinks 1.085        
cufflinks 0.698        
cufflinks 1.251       High
cufflinks 0.58        
cufflinks 0.224       Low
cufflinks 0.747        
cufflinks 0.765        
cufflinks 0.797        
cufflinks 0.742        
cufflinks 0.968        
cufflinks 0.701        
cufflinks 0.772        
cufflinks 0.772        
cufflinks 0.766        
cufflinks 1.031        

0 Strain