Gene : Bradi1g58380 B. distachyon v3.1
Defline:  (1 of 1) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  7362
Name:  ? Bradi1g58380 Secondary Identifier:  ? PAC:32802162
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58380 0.5kb upstream 0.5kb upstream 5035 true Bd1: 57408316-57413350 Brachypodium distachyon
Bradi1g58380 0.5kb upstream 0.5kb upstream 500 false Bd1: 57412851-57413350 Brachypodium distachyon
Bradi1g58380 0.5kb downstream 0.5kb downstream 5035 true Bd1: 57407816-57412850 Brachypodium distachyon
Bradi1g58380 0.5kb downstream 0.5kb downstream 500 false Bd1: 57407816-57408315 Brachypodium distachyon
Bradi1g58380 1.0kb upstream 1.0kb upstream 5535 true Bd1: 57408316-57413850 Brachypodium distachyon
Bradi1g58380 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57412851-57413850 Brachypodium distachyon
Bradi1g58380 1.0kb downstream 1.0kb downstream 5535 true Bd1: 57407316-57412850 Brachypodium distachyon
Bradi1g58380 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57407316-57408315 Brachypodium distachyon
Bradi1g58380 2.0kb upstream 2.0kb upstream 6535 true Bd1: 57408316-57414850 Brachypodium distachyon
Bradi1g58380 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57412851-57414850 Brachypodium distachyon
Bradi1g58380 2.0kb downstream 2.0kb downstream 6535 true Bd1: 57406316-57412850 Brachypodium distachyon
Bradi1g58380 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57406316-57408315 Brachypodium distachyon
Bradi1g58380 5.0kb upstream 5.0kb upstream 9535 true Bd1: 57408316-57417850 Brachypodium distachyon
Bradi1g58380 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57412851-57417850 Brachypodium distachyon
Bradi1g58380 5.0kb downstream 5.0kb downstream 9535 true Bd1: 57403316-57412850 Brachypodium distachyon
Bradi1g58380 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57403316-57408315 Brachypodium distachyon
Bradi1g58380 10.0kb upstream 10.0kb upstream 14535 true Bd1: 57408316-57422850 Brachypodium distachyon
Bradi1g58380 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57412851-57422850 Brachypodium distachyon
Bradi1g58380 10.0kb downstream 10.0kb downstream 14535 true Bd1: 57398316-57412850 Brachypodium distachyon
Bradi1g58380 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57398316-57408315 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579686 5269 Grass View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.081     High  
cufflinks 25.964     High  
cufflinks 29.343     High  
cufflinks 18.866     High  
cufflinks 133.039     High High
cufflinks 17.862     High  
cufflinks 22.277     High  
cufflinks 24.361     High  
cufflinks 19.812     High  
cufflinks 11.511     High Low
cufflinks 19.923     High  
cufflinks 30.247     High  
cufflinks 23.707     High  
cufflinks 10.984     High Low
cufflinks 22.903     High  
cufflinks 19.774     High  
cufflinks 15.563     High  
cufflinks 34.959     High  
cufflinks 156.332     High High
cufflinks 45.217     High  
cufflinks 19.481     High  
cufflinks 26.473     High  
cufflinks 38.14     High  
cufflinks 23.36     High  
cufflinks 15.053     High  
cufflinks 25.758     High  
cufflinks 13.749     High  
cufflinks 24.725     High  
cufflinks 22.773     High  
cufflinks 52.756     High High

0 Strain