Gene : Bradi1g58715 B. distachyon v3.1
Defline:  (1 of 23) PF08224 - Domain of unknown function (DUF1719) (DUF1719) Genomic Order:  7415
Name:  ? Bradi1g58715 Secondary Identifier:  ? PAC:32803946
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58715 0.5kb upstream 0.5kb upstream 3822 true Bd1: 57894993-57898814 Brachypodium distachyon
Bradi1g58715 0.5kb upstream 0.5kb upstream 500 false Bd1: 57898315-57898814 Brachypodium distachyon
Bradi1g58715 0.5kb downstream 0.5kb downstream 3822 true Bd1: 57894493-57898314 Brachypodium distachyon
Bradi1g58715 0.5kb downstream 0.5kb downstream 500 false Bd1: 57894493-57894992 Brachypodium distachyon
Bradi1g58715 1.0kb upstream 1.0kb upstream 4322 true Bd1: 57894993-57899314 Brachypodium distachyon
Bradi1g58715 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57898315-57899314 Brachypodium distachyon
Bradi1g58715 1.0kb downstream 1.0kb downstream 4322 true Bd1: 57893993-57898314 Brachypodium distachyon
Bradi1g58715 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57893993-57894992 Brachypodium distachyon
Bradi1g58715 2.0kb upstream 2.0kb upstream 5322 true Bd1: 57894993-57900314 Brachypodium distachyon
Bradi1g58715 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57898315-57900314 Brachypodium distachyon
Bradi1g58715 2.0kb downstream 2.0kb downstream 5322 true Bd1: 57892993-57898314 Brachypodium distachyon
Bradi1g58715 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57892993-57894992 Brachypodium distachyon
Bradi1g58715 5.0kb upstream 5.0kb upstream 8322 true Bd1: 57894993-57903314 Brachypodium distachyon
Bradi1g58715 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57898315-57903314 Brachypodium distachyon
Bradi1g58715 5.0kb downstream 5.0kb downstream 8322 true Bd1: 57889993-57898314 Brachypodium distachyon
Bradi1g58715 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57889993-57894992 Brachypodium distachyon
Bradi1g58715 10.0kb upstream 10.0kb upstream 13322 true Bd1: 57894993-57908314 Brachypodium distachyon
Bradi1g58715 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57898315-57908314 Brachypodium distachyon
Bradi1g58715 10.0kb downstream 10.0kb downstream 13322 true Bd1: 57884993-57898314 Brachypodium distachyon
Bradi1g58715 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57884993-57894992 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995949 5273 Angiosperm View MSA
124590260 5269 Grass View MSA
121266126 5274 Embryophyte View MSA
123304480 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.193        
cufflinks 0.16        
cufflinks 0.097        
cufflinks 0.218        
cufflinks 0.175        
cufflinks 0.143        
cufflinks 0.156        
cufflinks 0.189        
cufflinks 0.159        
cufflinks 0.163        
cufflinks 0.329       High
cufflinks 0.175        
cufflinks 0.076       Low
cufflinks 0.096        
cufflinks 0.451       High
cufflinks 0.121        
cufflinks 0.162     Low  
cufflinks 0.142     Low  
cufflinks 0.16     Low  
cufflinks 0.185        
cufflinks 0.197        
cufflinks 0.101     Low  
cufflinks 0.116        
cufflinks 0.146        
cufflinks 0.157        
cufflinks 0.145        
cufflinks 0.426       High
cufflinks 0.061     Low Low
cufflinks 0.142        
cufflinks 0.261       High

0 Strain