Gene : Bradi1g58720 B. distachyon v3.1
Defline:  (1 of 23) PF08224 - Domain of unknown function (DUF1719) (DUF1719) Genomic Order:  7416
Name:  ? Bradi1g58720 Secondary Identifier:  ? PAC:32801393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g58720 0.5kb upstream 0.5kb upstream 15805 true Bd1: 57900452-57916256 Brachypodium distachyon
Bradi1g58720 0.5kb upstream 0.5kb upstream 500 false Bd1: 57915757-57916256 Brachypodium distachyon
Bradi1g58720 0.5kb downstream 0.5kb downstream 15805 true Bd1: 57899952-57915756 Brachypodium distachyon
Bradi1g58720 0.5kb downstream 0.5kb downstream 500 false Bd1: 57899952-57900451 Brachypodium distachyon
Bradi1g58720 1.0kb upstream 1.0kb upstream 16305 true Bd1: 57900452-57916756 Brachypodium distachyon
Bradi1g58720 1.0kb upstream 1.0kb upstream 1000 false Bd1: 57915757-57916756 Brachypodium distachyon
Bradi1g58720 1.0kb downstream 1.0kb downstream 16305 true Bd1: 57899452-57915756 Brachypodium distachyon
Bradi1g58720 1.0kb downstream 1.0kb downstream 1000 false Bd1: 57899452-57900451 Brachypodium distachyon
Bradi1g58720 2.0kb upstream 2.0kb upstream 17305 true Bd1: 57900452-57917756 Brachypodium distachyon
Bradi1g58720 2.0kb upstream 2.0kb upstream 2000 false Bd1: 57915757-57917756 Brachypodium distachyon
Bradi1g58720 2.0kb downstream 2.0kb downstream 17305 true Bd1: 57898452-57915756 Brachypodium distachyon
Bradi1g58720 2.0kb downstream 2.0kb downstream 2000 false Bd1: 57898452-57900451 Brachypodium distachyon
Bradi1g58720 5.0kb upstream 5.0kb upstream 20305 true Bd1: 57900452-57920756 Brachypodium distachyon
Bradi1g58720 5.0kb upstream 5.0kb upstream 5000 false Bd1: 57915757-57920756 Brachypodium distachyon
Bradi1g58720 5.0kb downstream 5.0kb downstream 20305 true Bd1: 57895452-57915756 Brachypodium distachyon
Bradi1g58720 5.0kb downstream 5.0kb downstream 5000 false Bd1: 57895452-57900451 Brachypodium distachyon
Bradi1g58720 10.0kb upstream 10.0kb upstream 25305 true Bd1: 57900452-57925756 Brachypodium distachyon
Bradi1g58720 10.0kb upstream 10.0kb upstream 10000 false Bd1: 57915757-57925756 Brachypodium distachyon
Bradi1g58720 10.0kb downstream 10.0kb downstream 25305 true Bd1: 57890452-57915756 Brachypodium distachyon
Bradi1g58720 10.0kb downstream 10.0kb downstream 10000 false Bd1: 57890452-57900451 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995949 5273 Angiosperm View MSA
124590260 5269 Grass View MSA
121266126 5274 Embryophyte View MSA
123304480 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.335       Low
cufflinks 0.878        
cufflinks 0.798        
cufflinks 0.516        
cufflinks 0.637        
cufflinks 0.917        
cufflinks 0.802        
cufflinks 1.227        
cufflinks 0.684        
cufflinks 0.267       Low
cufflinks 5.055       High
cufflinks 2.334       High
cufflinks 1.059        
cufflinks 1.033        
cufflinks 1.202        
cufflinks 0.863        
cufflinks 0.142     Low Low
cufflinks 0.355        
cufflinks 0.977        
cufflinks 0.599        
cufflinks 1.097        
cufflinks 0.573        
cufflinks 0.399        
cufflinks 0.562        
cufflinks 0.596        
cufflinks 0.68        
cufflinks 1.946       High
cufflinks 0.752        
cufflinks 0.598        
cufflinks 0.94        

0 Strain