Gene : Bradi1g59035 B. distachyon v3.1
Defline:  (1 of 17) KOG1542 - Cysteine proteinase Cathepsin F Genomic Order:  7468
Name:  ? Bradi1g59035 Secondary Identifier:  ? PAC:32792002
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59035 0.5kb upstream 0.5kb upstream 3736 true Bd1: 58355014-58358749 Brachypodium distachyon
Bradi1g59035 0.5kb upstream 0.5kb upstream 500 false Bd1: 58355014-58355513 Brachypodium distachyon
Bradi1g59035 0.5kb downstream 0.5kb downstream 3736 true Bd1: 58355514-58359249 Brachypodium distachyon
Bradi1g59035 0.5kb downstream 0.5kb downstream 500 false Bd1: 58358750-58359249 Brachypodium distachyon
Bradi1g59035 1.0kb upstream 1.0kb upstream 4236 true Bd1: 58354514-58358749 Brachypodium distachyon
Bradi1g59035 1.0kb upstream 1.0kb upstream 1000 false Bd1: 58354514-58355513 Brachypodium distachyon
Bradi1g59035 1.0kb downstream 1.0kb downstream 4236 true Bd1: 58355514-58359749 Brachypodium distachyon
Bradi1g59035 1.0kb downstream 1.0kb downstream 1000 false Bd1: 58358750-58359749 Brachypodium distachyon
Bradi1g59035 2.0kb upstream 2.0kb upstream 5236 true Bd1: 58353514-58358749 Brachypodium distachyon
Bradi1g59035 2.0kb upstream 2.0kb upstream 2000 false Bd1: 58353514-58355513 Brachypodium distachyon
Bradi1g59035 2.0kb downstream 2.0kb downstream 5236 true Bd1: 58355514-58360749 Brachypodium distachyon
Bradi1g59035 2.0kb downstream 2.0kb downstream 2000 false Bd1: 58358750-58360749 Brachypodium distachyon
Bradi1g59035 5.0kb upstream 5.0kb upstream 8236 true Bd1: 58350514-58358749 Brachypodium distachyon
Bradi1g59035 5.0kb upstream 5.0kb upstream 5000 false Bd1: 58350514-58355513 Brachypodium distachyon
Bradi1g59035 5.0kb downstream 5.0kb downstream 8236 true Bd1: 58355514-58363749 Brachypodium distachyon
Bradi1g59035 5.0kb downstream 5.0kb downstream 5000 false Bd1: 58358750-58363749 Brachypodium distachyon
Bradi1g59035 10.0kb upstream 10.0kb upstream 13236 true Bd1: 58345514-58358749 Brachypodium distachyon
Bradi1g59035 10.0kb upstream 10.0kb upstream 10000 false Bd1: 58345514-58355513 Brachypodium distachyon
Bradi1g59035 10.0kb downstream 10.0kb downstream 13236 true Bd1: 58355514-58368749 Brachypodium distachyon
Bradi1g59035 10.0kb downstream 10.0kb downstream 10000 false Bd1: 58358750-58368749 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031130 5273 Angiosperm View MSA
124468890 5269 Grass Singleton cluster - no MSA
121300222 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.066     Low  
cufflinks 0.037     Low  
cufflinks 0.048     Low  
cufflinks 0.066     Low  
cufflinks 0.059     Low  
cufflinks 0.043     Low  
cufflinks 0.038     Low  
cufflinks 0.03     Low  
cufflinks 0.061     Low  
cufflinks 0.025     Low  
cufflinks 0.007     Low Low
cufflinks 0.039     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.05     Low  
cufflinks 0.035     Low  
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.079     Low  
cufflinks 0.039     Low  
cufflinks 0.059     Low  
cufflinks 0.035     Low  
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  

0 Strain