Gene : Bradi1g59450 B. distachyon v3.1
Defline:  (1 of 2) PTHR30546//PTHR30546:SF4 - FLAVODOXIN-RELATED PROTEIN WRBA-RELATED Genomic Order:  7521
Name:  ? Bradi1g59450 Secondary Identifier:  ? PAC:32797802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7279 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59450 0.5kb upstream 0.5kb upstream 1681 true Bd1: 58710908-58712588 Brachypodium distachyon
Bradi1g59450 0.5kb upstream 0.5kb upstream 500 false Bd1: 58710908-58711407 Brachypodium distachyon
Bradi1g59450 0.5kb downstream 0.5kb downstream 1681 true Bd1: 58711408-58713088 Brachypodium distachyon
Bradi1g59450 0.5kb downstream 0.5kb downstream 500 false Bd1: 58712589-58713088 Brachypodium distachyon
Bradi1g59450 1.0kb upstream 1.0kb upstream 2181 true Bd1: 58710408-58712588 Brachypodium distachyon
Bradi1g59450 1.0kb upstream 1.0kb upstream 1000 false Bd1: 58710408-58711407 Brachypodium distachyon
Bradi1g59450 1.0kb downstream 1.0kb downstream 2181 true Bd1: 58711408-58713588 Brachypodium distachyon
Bradi1g59450 1.0kb downstream 1.0kb downstream 1000 false Bd1: 58712589-58713588 Brachypodium distachyon
Bradi1g59450 2.0kb upstream 2.0kb upstream 3181 true Bd1: 58709408-58712588 Brachypodium distachyon
Bradi1g59450 2.0kb upstream 2.0kb upstream 2000 false Bd1: 58709408-58711407 Brachypodium distachyon
Bradi1g59450 2.0kb downstream 2.0kb downstream 3181 true Bd1: 58711408-58714588 Brachypodium distachyon
Bradi1g59450 2.0kb downstream 2.0kb downstream 2000 false Bd1: 58712589-58714588 Brachypodium distachyon
Bradi1g59450 5.0kb upstream 5.0kb upstream 6181 true Bd1: 58706408-58712588 Brachypodium distachyon
Bradi1g59450 5.0kb upstream 5.0kb upstream 5000 false Bd1: 58706408-58711407 Brachypodium distachyon
Bradi1g59450 5.0kb downstream 5.0kb downstream 6181 true Bd1: 58711408-58717588 Brachypodium distachyon
Bradi1g59450 5.0kb downstream 5.0kb downstream 5000 false Bd1: 58712589-58717588 Brachypodium distachyon
Bradi1g59450 10.0kb upstream 10.0kb upstream 11181 true Bd1: 58701408-58712588 Brachypodium distachyon
Bradi1g59450 10.0kb upstream 10.0kb upstream 10000 false Bd1: 58701408-58711407 Brachypodium distachyon
Bradi1g59450 10.0kb downstream 10.0kb downstream 11181 true Bd1: 58711408-58722588 Brachypodium distachyon
Bradi1g59450 10.0kb downstream 10.0kb downstream 10000 false Bd1: 58712589-58722588 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994085 5273 Angiosperm View MSA
124582829 5269 Grass View MSA
121352058 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.522        
cufflinks 0.263        
cufflinks 0.193        
cufflinks 0.727        
cufflinks 0.837        
cufflinks 0.237        
cufflinks 0.384        
cufflinks 0.129        
cufflinks 0.192        
cufflinks 0.172        
cufflinks 0.014     Low Low
cufflinks 0.114        
cufflinks 0.106        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.144        
cufflinks 0.463        
cufflinks 0.291        
cufflinks 10.98       High
cufflinks 0.45        
cufflinks 12.438     High High
cufflinks 1.165        
cufflinks 0.208        
cufflinks 0.169        
cufflinks 0.21        
cufflinks 0.464        
cufflinks 0.383        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.322        
cufflinks 0.717        
cufflinks 0.862        

0 Strain