Gene : Bradi1g55030 B. distachyon v3.1
Defline:  (1 of 1) 1.1.99.2//1.1.99.39 - L-2-hydroxyglutarate dehydrogenase / L-alpha-hydroxyglutarate dehydrogenase // D-2-hydroxyglutarate dehydrogenase Genomic Order:  6892
Name:  ? Bradi1g55030 Secondary Identifier:  ? PAC:32802052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g55030 0.5kb upstream 0.5kb upstream 9169 true Bd1: 53591718-53600886 Brachypodium distachyon
Bradi1g55030 0.5kb upstream 0.5kb upstream 500 false Bd1: 53600387-53600886 Brachypodium distachyon
Bradi1g55030 0.5kb downstream 0.5kb downstream 9169 true Bd1: 53591218-53600386 Brachypodium distachyon
Bradi1g55030 0.5kb downstream 0.5kb downstream 500 false Bd1: 53591218-53591717 Brachypodium distachyon
Bradi1g55030 1.0kb upstream 1.0kb upstream 9669 true Bd1: 53591718-53601386 Brachypodium distachyon
Bradi1g55030 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53600387-53601386 Brachypodium distachyon
Bradi1g55030 1.0kb downstream 1.0kb downstream 9669 true Bd1: 53590718-53600386 Brachypodium distachyon
Bradi1g55030 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53590718-53591717 Brachypodium distachyon
Bradi1g55030 2.0kb upstream 2.0kb upstream 10669 true Bd1: 53591718-53602386 Brachypodium distachyon
Bradi1g55030 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53600387-53602386 Brachypodium distachyon
Bradi1g55030 2.0kb downstream 2.0kb downstream 10669 true Bd1: 53589718-53600386 Brachypodium distachyon
Bradi1g55030 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53589718-53591717 Brachypodium distachyon
Bradi1g55030 5.0kb upstream 5.0kb upstream 13669 true Bd1: 53591718-53605386 Brachypodium distachyon
Bradi1g55030 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53600387-53605386 Brachypodium distachyon
Bradi1g55030 5.0kb downstream 5.0kb downstream 13669 true Bd1: 53586718-53600386 Brachypodium distachyon
Bradi1g55030 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53586718-53591717 Brachypodium distachyon
Bradi1g55030 10.0kb upstream 10.0kb upstream 18669 true Bd1: 53591718-53610386 Brachypodium distachyon
Bradi1g55030 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53600387-53610386 Brachypodium distachyon
Bradi1g55030 10.0kb downstream 10.0kb downstream 18669 true Bd1: 53581718-53600386 Brachypodium distachyon
Bradi1g55030 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53581718-53591717 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568431 5269 Grass View MSA
122041768 5273 Angiosperm View MSA
121347164 5274 Embryophyte View MSA
123425580 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.308        
cufflinks 1.658        
cufflinks 1.586        
cufflinks 1.576        
cufflinks 1.132       Low
cufflinks 1.597        
cufflinks 1.551        
cufflinks 1.478        
cufflinks 1.502        
cufflinks 1.197        
cufflinks 1.294        
cufflinks 1.557        
cufflinks 1.609        
cufflinks 1.485        
cufflinks 1.6        
cufflinks 1.776        
cufflinks 1.379        
cufflinks 2.401       High
cufflinks 1.611        
cufflinks 1.007       Low
cufflinks 1.782        
cufflinks 1.504        
cufflinks 1.52        
cufflinks 1.534        
cufflinks 1.484        
cufflinks 1.545        
cufflinks 1.827        
cufflinks 1.291        
cufflinks 1.435        
cufflinks 1.828        

0 Strain