Gene : Bradi1g55250 B. distachyon v3.1
Defline:  (1 of 1) K10884 - ATP-dependent DNA helicase 2 subunit 1 (XRCC6, KU70, G22P1) Genomic Order:  6920
Name:  ? Bradi1g55250 Secondary Identifier:  ? PAC:32797740
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g55250 0.5kb upstream 0.5kb upstream 12711 true Bd1: 53857279-53869989 Brachypodium distachyon
Bradi1g55250 0.5kb upstream 0.5kb upstream 500 false Bd1: 53869490-53869989 Brachypodium distachyon
Bradi1g55250 0.5kb downstream 0.5kb downstream 12711 true Bd1: 53856779-53869489 Brachypodium distachyon
Bradi1g55250 0.5kb downstream 0.5kb downstream 500 false Bd1: 53856779-53857278 Brachypodium distachyon
Bradi1g55250 1.0kb upstream 1.0kb upstream 13211 true Bd1: 53857279-53870489 Brachypodium distachyon
Bradi1g55250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53869490-53870489 Brachypodium distachyon
Bradi1g55250 1.0kb downstream 1.0kb downstream 13211 true Bd1: 53856279-53869489 Brachypodium distachyon
Bradi1g55250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53856279-53857278 Brachypodium distachyon
Bradi1g55250 2.0kb upstream 2.0kb upstream 14211 true Bd1: 53857279-53871489 Brachypodium distachyon
Bradi1g55250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53869490-53871489 Brachypodium distachyon
Bradi1g55250 2.0kb downstream 2.0kb downstream 14211 true Bd1: 53855279-53869489 Brachypodium distachyon
Bradi1g55250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53855279-53857278 Brachypodium distachyon
Bradi1g55250 5.0kb upstream 5.0kb upstream 17211 true Bd1: 53857279-53874489 Brachypodium distachyon
Bradi1g55250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53869490-53874489 Brachypodium distachyon
Bradi1g55250 5.0kb downstream 5.0kb downstream 17211 true Bd1: 53852279-53869489 Brachypodium distachyon
Bradi1g55250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53852279-53857278 Brachypodium distachyon
Bradi1g55250 10.0kb upstream 10.0kb upstream 22211 true Bd1: 53857279-53879489 Brachypodium distachyon
Bradi1g55250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53869490-53879489 Brachypodium distachyon
Bradi1g55250 10.0kb downstream 10.0kb downstream 22211 true Bd1: 53847279-53869489 Brachypodium distachyon
Bradi1g55250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53847279-53857278 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580278 5269 Grass View MSA
122048334 5273 Angiosperm View MSA
121348405 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.962        
cufflinks 1.793        
cufflinks 1.544        
cufflinks 1.516        
cufflinks 0.908        
cufflinks 1.481        
cufflinks 1.562        
cufflinks 1.515        
cufflinks 1.454        
cufflinks 0.839        
cufflinks 0.993        
cufflinks 1.445        
cufflinks 0.71       Low
cufflinks 0.611       Low
cufflinks 0.883        
cufflinks 1.551        
cufflinks 1.186        
cufflinks 3.695       High
cufflinks 1.325        
cufflinks 0.208       Low
cufflinks 1.101        
cufflinks 1.29        
cufflinks 1.398        
cufflinks 1.291        
cufflinks 1.388        
cufflinks 1.245        
cufflinks 0.82        
cufflinks 1.068        
cufflinks 1.241        
cufflinks 1.515        

0 Strain