Gene : Bradi1g55310 B. distachyon v3.1
Defline:  (1 of 2) PTHR10026:SF13 - CYCLIN-L1-RELATED Genomic Order:  6926
Name:  ? Bradi1g55310 Secondary Identifier:  ? PAC:32792766
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g55310 0.5kb upstream 0.5kb upstream 4550 true Bd1: 53922312-53926861 Brachypodium distachyon
Bradi1g55310 0.5kb upstream 0.5kb upstream 500 false Bd1: 53926362-53926861 Brachypodium distachyon
Bradi1g55310 0.5kb downstream 0.5kb downstream 4550 true Bd1: 53921812-53926361 Brachypodium distachyon
Bradi1g55310 0.5kb downstream 0.5kb downstream 500 false Bd1: 53921812-53922311 Brachypodium distachyon
Bradi1g55310 1.0kb upstream 1.0kb upstream 5050 true Bd1: 53922312-53927361 Brachypodium distachyon
Bradi1g55310 1.0kb upstream 1.0kb upstream 1000 false Bd1: 53926362-53927361 Brachypodium distachyon
Bradi1g55310 1.0kb downstream 1.0kb downstream 5050 true Bd1: 53921312-53926361 Brachypodium distachyon
Bradi1g55310 1.0kb downstream 1.0kb downstream 1000 false Bd1: 53921312-53922311 Brachypodium distachyon
Bradi1g55310 2.0kb upstream 2.0kb upstream 6050 true Bd1: 53922312-53928361 Brachypodium distachyon
Bradi1g55310 2.0kb upstream 2.0kb upstream 2000 false Bd1: 53926362-53928361 Brachypodium distachyon
Bradi1g55310 2.0kb downstream 2.0kb downstream 6050 true Bd1: 53920312-53926361 Brachypodium distachyon
Bradi1g55310 2.0kb downstream 2.0kb downstream 2000 false Bd1: 53920312-53922311 Brachypodium distachyon
Bradi1g55310 5.0kb upstream 5.0kb upstream 9050 true Bd1: 53922312-53931361 Brachypodium distachyon
Bradi1g55310 5.0kb upstream 5.0kb upstream 5000 false Bd1: 53926362-53931361 Brachypodium distachyon
Bradi1g55310 5.0kb downstream 5.0kb downstream 9050 true Bd1: 53917312-53926361 Brachypodium distachyon
Bradi1g55310 5.0kb downstream 5.0kb downstream 5000 false Bd1: 53917312-53922311 Brachypodium distachyon
Bradi1g55310 10.0kb upstream 10.0kb upstream 14050 true Bd1: 53922312-53936361 Brachypodium distachyon
Bradi1g55310 10.0kb upstream 10.0kb upstream 10000 false Bd1: 53926362-53936361 Brachypodium distachyon
Bradi1g55310 10.0kb downstream 10.0kb downstream 14050 true Bd1: 53912312-53926361 Brachypodium distachyon
Bradi1g55310 10.0kb downstream 10.0kb downstream 10000 false Bd1: 53912312-53922311 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574558 5269 Grass View MSA
122045443 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121349328 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.949        
cufflinks 8.499        
cufflinks 10.779     High  
cufflinks 8.566        
cufflinks 11.171     High  
cufflinks 8.007        
cufflinks 7.544        
cufflinks 7.68        
cufflinks 8.278        
cufflinks 10.231        
cufflinks 8.324        
cufflinks 8.439        
cufflinks 6.222       Low
cufflinks 6.156       Low
cufflinks 7.859        
cufflinks 7.835        
cufflinks 9.503        
cufflinks 12.399     High High
cufflinks 14.795     High High
cufflinks 13.617     High High
cufflinks 11.334     High  
cufflinks 11.148     High  
cufflinks 7.883        
cufflinks 7.747        
cufflinks 8.449        
cufflinks 11.44     High  
cufflinks 8.175        
cufflinks 11.718     High  
cufflinks 10.689        
cufflinks 11.449     High  

0 Strain