Gene : Bradi5g14830 B. distachyon v3.1
Defline:  (1 of 1) PTHR21512:SF5 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 Genomic Order:  1665
Name:  ? Bradi5g14830 Secondary Identifier:  ? PAC:32809106
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g14830 0.5kb upstream 0.5kb upstream 8297 true Bd5: 18389327-18397623 Brachypodium distachyon
Bradi5g14830 0.5kb upstream 0.5kb upstream 500 false Bd5: 18389327-18389826 Brachypodium distachyon
Bradi5g14830 0.5kb downstream 0.5kb downstream 8297 true Bd5: 18389827-18398123 Brachypodium distachyon
Bradi5g14830 0.5kb downstream 0.5kb downstream 500 false Bd5: 18397624-18398123 Brachypodium distachyon
Bradi5g14830 1.0kb upstream 1.0kb upstream 8797 true Bd5: 18388827-18397623 Brachypodium distachyon
Bradi5g14830 1.0kb upstream 1.0kb upstream 1000 false Bd5: 18388827-18389826 Brachypodium distachyon
Bradi5g14830 1.0kb downstream 1.0kb downstream 8797 true Bd5: 18389827-18398623 Brachypodium distachyon
Bradi5g14830 1.0kb downstream 1.0kb downstream 1000 false Bd5: 18397624-18398623 Brachypodium distachyon
Bradi5g14830 2.0kb upstream 2.0kb upstream 9797 true Bd5: 18387827-18397623 Brachypodium distachyon
Bradi5g14830 2.0kb upstream 2.0kb upstream 2000 false Bd5: 18387827-18389826 Brachypodium distachyon
Bradi5g14830 2.0kb downstream 2.0kb downstream 9797 true Bd5: 18389827-18399623 Brachypodium distachyon
Bradi5g14830 2.0kb downstream 2.0kb downstream 2000 false Bd5: 18397624-18399623 Brachypodium distachyon
Bradi5g14830 5.0kb upstream 5.0kb upstream 12797 true Bd5: 18384827-18397623 Brachypodium distachyon
Bradi5g14830 5.0kb upstream 5.0kb upstream 5000 false Bd5: 18384827-18389826 Brachypodium distachyon
Bradi5g14830 5.0kb downstream 5.0kb downstream 12797 true Bd5: 18389827-18402623 Brachypodium distachyon
Bradi5g14830 5.0kb downstream 5.0kb downstream 5000 false Bd5: 18397624-18402623 Brachypodium distachyon
Bradi5g14830 10.0kb upstream 10.0kb upstream 17797 true Bd5: 18379827-18397623 Brachypodium distachyon
Bradi5g14830 10.0kb upstream 10.0kb upstream 10000 false Bd5: 18379827-18389826 Brachypodium distachyon
Bradi5g14830 10.0kb downstream 10.0kb downstream 17797 true Bd5: 18389827-18407623 Brachypodium distachyon
Bradi5g14830 10.0kb downstream 10.0kb downstream 10000 false Bd5: 18397624-18407623 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572977 5269 Grass View MSA
122047010 5273 Angiosperm View MSA
121344972 5274 Embryophyte View MSA
123380135 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.398        
cufflinks 5.065        
cufflinks 5.26        
cufflinks 3.971        
cufflinks 2.499        
cufflinks 4.496        
cufflinks 4.022        
cufflinks 3.673        
cufflinks 4.0        
cufflinks 2.724        
cufflinks 2.589        
cufflinks 4.247        
cufflinks 1.871       Low
cufflinks 1.749       Low
cufflinks 2.531        
cufflinks 4.474        
cufflinks 2.804        
cufflinks 9.197       High
cufflinks 3.704        
cufflinks 1.445       Low
cufflinks 5.366        
cufflinks 4.594        
cufflinks 3.646        
cufflinks 3.795        
cufflinks 3.453        
cufflinks 4.747        
cufflinks 2.412        
cufflinks 4.173        
cufflinks 3.979        
cufflinks 7.049       High

0 Strain