Gene : Bradi5g14780 B. distachyon v3.1
Defline:  (1 of 2) PTHR14499//PTHR14499:SF70 - POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1659
Name:  ? Bradi5g14780 Secondary Identifier:  ? PAC:32811369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g14780 0.5kb upstream 0.5kb upstream 2291 true Bd5: 18360597-18362887 Brachypodium distachyon
Bradi5g14780 0.5kb upstream 0.5kb upstream 500 false Bd5: 18362388-18362887 Brachypodium distachyon
Bradi5g14780 0.5kb downstream 0.5kb downstream 2291 true Bd5: 18360097-18362387 Brachypodium distachyon
Bradi5g14780 0.5kb downstream 0.5kb downstream 500 false Bd5: 18360097-18360596 Brachypodium distachyon
Bradi5g14780 1.0kb upstream 1.0kb upstream 2791 true Bd5: 18360597-18363387 Brachypodium distachyon
Bradi5g14780 1.0kb upstream 1.0kb upstream 1000 false Bd5: 18362388-18363387 Brachypodium distachyon
Bradi5g14780 1.0kb downstream 1.0kb downstream 2791 true Bd5: 18359597-18362387 Brachypodium distachyon
Bradi5g14780 1.0kb downstream 1.0kb downstream 1000 false Bd5: 18359597-18360596 Brachypodium distachyon
Bradi5g14780 2.0kb upstream 2.0kb upstream 3791 true Bd5: 18360597-18364387 Brachypodium distachyon
Bradi5g14780 2.0kb upstream 2.0kb upstream 2000 false Bd5: 18362388-18364387 Brachypodium distachyon
Bradi5g14780 2.0kb downstream 2.0kb downstream 3791 true Bd5: 18358597-18362387 Brachypodium distachyon
Bradi5g14780 2.0kb downstream 2.0kb downstream 2000 false Bd5: 18358597-18360596 Brachypodium distachyon
Bradi5g14780 5.0kb upstream 5.0kb upstream 6791 true Bd5: 18360597-18367387 Brachypodium distachyon
Bradi5g14780 5.0kb upstream 5.0kb upstream 5000 false Bd5: 18362388-18367387 Brachypodium distachyon
Bradi5g14780 5.0kb downstream 5.0kb downstream 6791 true Bd5: 18355597-18362387 Brachypodium distachyon
Bradi5g14780 5.0kb downstream 5.0kb downstream 5000 false Bd5: 18355597-18360596 Brachypodium distachyon
Bradi5g14780 10.0kb upstream 10.0kb upstream 11791 true Bd5: 18360597-18372387 Brachypodium distachyon
Bradi5g14780 10.0kb upstream 10.0kb upstream 10000 false Bd5: 18362388-18372387 Brachypodium distachyon
Bradi5g14780 10.0kb downstream 10.0kb downstream 11791 true Bd5: 18350597-18362387 Brachypodium distachyon
Bradi5g14780 10.0kb downstream 10.0kb downstream 10000 false Bd5: 18350597-18360596 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580243 5269 Grass View MSA
122045449 5273 Angiosperm View MSA
121344030 5274 Embryophyte View MSA
123379962 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.342        
cufflinks 0.589        
cufflinks 0.776        
cufflinks 0.438        
cufflinks 0.458        
cufflinks 0.626        
cufflinks 0.779        
cufflinks 0.475        
cufflinks 0.678        
cufflinks 0.55        
cufflinks 0.417        
cufflinks 0.481        
cufflinks 0.86        
cufflinks 0.451        
cufflinks 0.273       Low
cufflinks 0.845        
cufflinks 0.612        
cufflinks 3.644       High
cufflinks 0.673        
cufflinks 0.232       Low
cufflinks 1.013        
cufflinks 0.382        
cufflinks 0.436        
cufflinks 0.465        
cufflinks 0.649        
cufflinks 0.522        
cufflinks 0.324        
cufflinks 0.714        
cufflinks 0.493        
cufflinks 1.219       High

0 Strain