Gene : Bradi1g56730 B. distachyon v3.1
Defline:  (1 of 1) PF11347 - Protein of unknown function (DUF3148) (DUF3148) Genomic Order:  7114
Name:  ? Bradi1g56730 Secondary Identifier:  ? PAC:32794793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56730 0.5kb upstream 0.5kb upstream 2168 true Bd1: 55562206-55564373 Brachypodium distachyon
Bradi1g56730 0.5kb upstream 0.5kb upstream 500 false Bd1: 55563874-55564373 Brachypodium distachyon
Bradi1g56730 0.5kb downstream 0.5kb downstream 2168 true Bd1: 55561706-55563873 Brachypodium distachyon
Bradi1g56730 0.5kb downstream 0.5kb downstream 500 false Bd1: 55561706-55562205 Brachypodium distachyon
Bradi1g56730 1.0kb upstream 1.0kb upstream 2668 true Bd1: 55562206-55564873 Brachypodium distachyon
Bradi1g56730 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55563874-55564873 Brachypodium distachyon
Bradi1g56730 1.0kb downstream 1.0kb downstream 2668 true Bd1: 55561206-55563873 Brachypodium distachyon
Bradi1g56730 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55561206-55562205 Brachypodium distachyon
Bradi1g56730 2.0kb upstream 2.0kb upstream 3668 true Bd1: 55562206-55565873 Brachypodium distachyon
Bradi1g56730 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55563874-55565873 Brachypodium distachyon
Bradi1g56730 2.0kb downstream 2.0kb downstream 3668 true Bd1: 55560206-55563873 Brachypodium distachyon
Bradi1g56730 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55560206-55562205 Brachypodium distachyon
Bradi1g56730 5.0kb upstream 5.0kb upstream 6668 true Bd1: 55562206-55568873 Brachypodium distachyon
Bradi1g56730 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55563874-55568873 Brachypodium distachyon
Bradi1g56730 5.0kb downstream 5.0kb downstream 6668 true Bd1: 55557206-55563873 Brachypodium distachyon
Bradi1g56730 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55557206-55562205 Brachypodium distachyon
Bradi1g56730 10.0kb upstream 10.0kb upstream 11668 true Bd1: 55562206-55573873 Brachypodium distachyon
Bradi1g56730 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55563874-55573873 Brachypodium distachyon
Bradi1g56730 10.0kb downstream 10.0kb downstream 11668 true Bd1: 55552206-55563873 Brachypodium distachyon
Bradi1g56730 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55552206-55562205 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573718 5269 Grass View MSA
122044636 5273 Angiosperm View MSA
121348938 5274 Embryophyte View MSA
123381087 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.469        
cufflinks 2.251        
cufflinks 2.769        
cufflinks 4.186        
cufflinks 1.007        
cufflinks 2.023        
cufflinks 3.273        
cufflinks 1.511        
cufflinks 2.191        
cufflinks 6.111        
cufflinks 3.907        
cufflinks 0.656        
cufflinks 1.613        
cufflinks 2.715        
cufflinks 1.179        
cufflinks 1.772        
cufflinks 3.897        
cufflinks 0.09     Low Low
cufflinks 4.222        
cufflinks 0.184       Low
cufflinks 3.556        
cufflinks 2.387        
cufflinks 2.466        
cufflinks 2.1        
cufflinks 3.698        
cufflinks 4.27        
cufflinks 1.607        
cufflinks 7.522       High
cufflinks 5.619        
cufflinks 1.581        

0 Strain