Gene : Bradi1g62170 B. distachyon v3.1
Defline:  (1 of 1) PTHR11655:SF14 - 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL Genomic Order:  7871
Name:  ? Bradi1g62170 Secondary Identifier:  ? PAC:32797325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62170 0.5kb upstream 0.5kb upstream 4176 true Bd1: 61669837-61674012 Brachypodium distachyon
Bradi1g62170 0.5kb upstream 0.5kb upstream 500 false Bd1: 61669837-61670336 Brachypodium distachyon
Bradi1g62170 0.5kb downstream 0.5kb downstream 4176 true Bd1: 61670337-61674512 Brachypodium distachyon
Bradi1g62170 0.5kb downstream 0.5kb downstream 500 false Bd1: 61674013-61674512 Brachypodium distachyon
Bradi1g62170 1.0kb upstream 1.0kb upstream 4676 true Bd1: 61669337-61674012 Brachypodium distachyon
Bradi1g62170 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61669337-61670336 Brachypodium distachyon
Bradi1g62170 1.0kb downstream 1.0kb downstream 4676 true Bd1: 61670337-61675012 Brachypodium distachyon
Bradi1g62170 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61674013-61675012 Brachypodium distachyon
Bradi1g62170 2.0kb upstream 2.0kb upstream 5676 true Bd1: 61668337-61674012 Brachypodium distachyon
Bradi1g62170 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61668337-61670336 Brachypodium distachyon
Bradi1g62170 2.0kb downstream 2.0kb downstream 5676 true Bd1: 61670337-61676012 Brachypodium distachyon
Bradi1g62170 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61674013-61676012 Brachypodium distachyon
Bradi1g62170 5.0kb upstream 5.0kb upstream 8676 true Bd1: 61665337-61674012 Brachypodium distachyon
Bradi1g62170 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61665337-61670336 Brachypodium distachyon
Bradi1g62170 5.0kb downstream 5.0kb downstream 8676 true Bd1: 61670337-61679012 Brachypodium distachyon
Bradi1g62170 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61674013-61679012 Brachypodium distachyon
Bradi1g62170 10.0kb upstream 10.0kb upstream 13676 true Bd1: 61660337-61674012 Brachypodium distachyon
Bradi1g62170 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61660337-61670336 Brachypodium distachyon
Bradi1g62170 10.0kb downstream 10.0kb downstream 13676 true Bd1: 61670337-61684012 Brachypodium distachyon
Bradi1g62170 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61674013-61684012 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573754 5269 Grass View MSA
122045909 5273 Angiosperm View MSA
121344403 5274 Embryophyte View MSA
123424152 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 219.435     High  
cufflinks 197.379     High  
cufflinks 182.169     High  
cufflinks 269.221     High  
cufflinks 162.412     High  
cufflinks 160.293     High  
cufflinks 174.114     High  
cufflinks 138.746     High  
cufflinks 130.591     High  
cufflinks 251.651     High  
cufflinks 120.556     High  
cufflinks 179.552     High  
cufflinks 107.463     High  
cufflinks 126.643     High  
cufflinks 193.672     High  
cufflinks 184.585     High  
cufflinks 257.615     High  
cufflinks 11.64     High Low
cufflinks 150.708     High  
cufflinks 25.189     High Low
cufflinks 116.318     High  
cufflinks 162.186     High  
cufflinks 130.007     High  
cufflinks 144.561     High  
cufflinks 182.326     High  
cufflinks 249.378     High  
cufflinks 74.833     High  
cufflinks 200.621     High  
cufflinks 193.447     High  
cufflinks 183.059     High  

0 Strain