Gene : Bradi1g62390 B. distachyon v3.1
Defline:  (1 of 1) PTHR16517//PTHR16517:SF37 - TUBBY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  7897
Name:  ? Bradi1g62390 Secondary Identifier:  ? PAC:32804362
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62390 0.5kb upstream 0.5kb upstream 4823 true Bd1: 61853967-61858789 Brachypodium distachyon
Bradi1g62390 0.5kb upstream 0.5kb upstream 500 false Bd1: 61853967-61854466 Brachypodium distachyon
Bradi1g62390 0.5kb downstream 0.5kb downstream 4823 true Bd1: 61854467-61859289 Brachypodium distachyon
Bradi1g62390 0.5kb downstream 0.5kb downstream 500 false Bd1: 61858790-61859289 Brachypodium distachyon
Bradi1g62390 1.0kb upstream 1.0kb upstream 5323 true Bd1: 61853467-61858789 Brachypodium distachyon
Bradi1g62390 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61853467-61854466 Brachypodium distachyon
Bradi1g62390 1.0kb downstream 1.0kb downstream 5323 true Bd1: 61854467-61859789 Brachypodium distachyon
Bradi1g62390 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61858790-61859789 Brachypodium distachyon
Bradi1g62390 2.0kb upstream 2.0kb upstream 6323 true Bd1: 61852467-61858789 Brachypodium distachyon
Bradi1g62390 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61852467-61854466 Brachypodium distachyon
Bradi1g62390 2.0kb downstream 2.0kb downstream 6323 true Bd1: 61854467-61860789 Brachypodium distachyon
Bradi1g62390 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61858790-61860789 Brachypodium distachyon
Bradi1g62390 5.0kb upstream 5.0kb upstream 9323 true Bd1: 61849467-61858789 Brachypodium distachyon
Bradi1g62390 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61849467-61854466 Brachypodium distachyon
Bradi1g62390 5.0kb downstream 5.0kb downstream 9323 true Bd1: 61854467-61863789 Brachypodium distachyon
Bradi1g62390 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61858790-61863789 Brachypodium distachyon
Bradi1g62390 10.0kb upstream 10.0kb upstream 14323 true Bd1: 61844467-61858789 Brachypodium distachyon
Bradi1g62390 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61844467-61854466 Brachypodium distachyon
Bradi1g62390 10.0kb downstream 10.0kb downstream 14323 true Bd1: 61854467-61868789 Brachypodium distachyon
Bradi1g62390 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61858790-61868789 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568760 5269 Grass View MSA
122047610 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.993     High High
cufflinks 15.42     High  
cufflinks 14.703     High  
cufflinks 8.554        
cufflinks 7.193        
cufflinks 13.859     High  
cufflinks 20.439     High High
cufflinks 6.438       Low
cufflinks 9.117        
cufflinks 8.412        
cufflinks 14.96     High  
cufflinks 9.898     High  
cufflinks 15.5     High  
cufflinks 9.937     High  
cufflinks 8.606     High  
cufflinks 20.521     High High
cufflinks 8.303        
cufflinks 17.215     High  
cufflinks 16.476     High  
cufflinks 7.769        
cufflinks 11.674     High  
cufflinks 11.627     High  
cufflinks 6.28       Low
cufflinks 8.241        
cufflinks 11.395     High  
cufflinks 12.207     High  
cufflinks 12.351     High  
cufflinks 11.533     High  
cufflinks 9.355        
cufflinks 15.616     High  

0 Strain