Gene : Bradi1g62554 B. distachyon v3.1
Defline:  (1 of 1) PTHR32370:SF30 - BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 Genomic Order:  7913
Name:  ? Bradi1g62554 Secondary Identifier:  ? PAC:32797305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62554 0.5kb upstream 0.5kb upstream 3144 true Bd1: 61966406-61969549 Brachypodium distachyon
Bradi1g62554 0.5kb upstream 0.5kb upstream 500 false Bd1: 61966406-61966905 Brachypodium distachyon
Bradi1g62554 0.5kb downstream 0.5kb downstream 3144 true Bd1: 61966906-61970049 Brachypodium distachyon
Bradi1g62554 0.5kb downstream 0.5kb downstream 500 false Bd1: 61969550-61970049 Brachypodium distachyon
Bradi1g62554 1.0kb upstream 1.0kb upstream 3644 true Bd1: 61965906-61969549 Brachypodium distachyon
Bradi1g62554 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61965906-61966905 Brachypodium distachyon
Bradi1g62554 1.0kb downstream 1.0kb downstream 3644 true Bd1: 61966906-61970549 Brachypodium distachyon
Bradi1g62554 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61969550-61970549 Brachypodium distachyon
Bradi1g62554 2.0kb upstream 2.0kb upstream 4644 true Bd1: 61964906-61969549 Brachypodium distachyon
Bradi1g62554 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61964906-61966905 Brachypodium distachyon
Bradi1g62554 2.0kb downstream 2.0kb downstream 4644 true Bd1: 61966906-61971549 Brachypodium distachyon
Bradi1g62554 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61969550-61971549 Brachypodium distachyon
Bradi1g62554 5.0kb upstream 5.0kb upstream 7644 true Bd1: 61961906-61969549 Brachypodium distachyon
Bradi1g62554 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61961906-61966905 Brachypodium distachyon
Bradi1g62554 5.0kb downstream 5.0kb downstream 7644 true Bd1: 61966906-61974549 Brachypodium distachyon
Bradi1g62554 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61969550-61974549 Brachypodium distachyon
Bradi1g62554 10.0kb upstream 10.0kb upstream 12644 true Bd1: 61956906-61969549 Brachypodium distachyon
Bradi1g62554 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61956906-61966905 Brachypodium distachyon
Bradi1g62554 10.0kb downstream 10.0kb downstream 12644 true Bd1: 61966906-61979549 Brachypodium distachyon
Bradi1g62554 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61969550-61979549 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573781 5269 Grass View MSA
122042362 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.061     Low  
cufflinks 0.068     Low  
cufflinks 0.075     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.092        
cufflinks 0.084        
cufflinks 0.085     Low  
cufflinks 0.087     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.089     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.176       High
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.437       High
cufflinks 0.036     Low  
cufflinks 0.073     Low  
cufflinks 0.047     Low  
cufflinks 0.042     Low  
cufflinks 0.056     Low  
cufflinks 0.009     Low Low
cufflinks 0.065     Low  
cufflinks 0.052     Low  
cufflinks 0.257        

0 Strain