Gene : Bradi1g62760 B. distachyon v3.1
Defline:  (1 of 1) PTHR12606//PTHR12606:SF23 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  7940
Name:  ? Bradi1g62760 Secondary Identifier:  ? PAC:32796479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62760 0.5kb upstream 0.5kb upstream 6111 true Bd1: 62196674-62202784 Brachypodium distachyon
Bradi1g62760 0.5kb upstream 0.5kb upstream 500 false Bd1: 62196674-62197173 Brachypodium distachyon
Bradi1g62760 0.5kb downstream 0.5kb downstream 6111 true Bd1: 62197174-62203284 Brachypodium distachyon
Bradi1g62760 0.5kb downstream 0.5kb downstream 500 false Bd1: 62202785-62203284 Brachypodium distachyon
Bradi1g62760 1.0kb upstream 1.0kb upstream 6611 true Bd1: 62196174-62202784 Brachypodium distachyon
Bradi1g62760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 62196174-62197173 Brachypodium distachyon
Bradi1g62760 1.0kb downstream 1.0kb downstream 6611 true Bd1: 62197174-62203784 Brachypodium distachyon
Bradi1g62760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 62202785-62203784 Brachypodium distachyon
Bradi1g62760 2.0kb upstream 2.0kb upstream 7611 true Bd1: 62195174-62202784 Brachypodium distachyon
Bradi1g62760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 62195174-62197173 Brachypodium distachyon
Bradi1g62760 2.0kb downstream 2.0kb downstream 7611 true Bd1: 62197174-62204784 Brachypodium distachyon
Bradi1g62760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 62202785-62204784 Brachypodium distachyon
Bradi1g62760 5.0kb upstream 5.0kb upstream 10611 true Bd1: 62192174-62202784 Brachypodium distachyon
Bradi1g62760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 62192174-62197173 Brachypodium distachyon
Bradi1g62760 5.0kb downstream 5.0kb downstream 10611 true Bd1: 62197174-62207784 Brachypodium distachyon
Bradi1g62760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 62202785-62207784 Brachypodium distachyon
Bradi1g62760 10.0kb upstream 10.0kb upstream 15611 true Bd1: 62187174-62202784 Brachypodium distachyon
Bradi1g62760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 62187174-62197173 Brachypodium distachyon
Bradi1g62760 10.0kb downstream 10.0kb downstream 15611 true Bd1: 62197174-62212784 Brachypodium distachyon
Bradi1g62760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 62202785-62212784 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582593 5269 Grass View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.532       Low
cufflinks 3.511        
cufflinks 3.346        
cufflinks 3.95        
cufflinks 2.647       Low
cufflinks 3.349        
cufflinks 3.178        
cufflinks 2.91        
cufflinks 3.442        
cufflinks 4.278        
cufflinks 3.309        
cufflinks 3.311        
cufflinks 3.012        
cufflinks 3.602        
cufflinks 3.291        
cufflinks 2.986        
cufflinks 3.731        
cufflinks 4.927       High
cufflinks 2.991        
cufflinks 2.373       Low
cufflinks 3.859        
cufflinks 3.513        
cufflinks 3.153        
cufflinks 3.292        
cufflinks 3.769        
cufflinks 3.776        
cufflinks 4.876       High
cufflinks 3.733        
cufflinks 3.522        
cufflinks 3.888        

0 Strain