Gene : Bradi1g59970 B. distachyon v3.1
Defline:  (1 of 1) PTHR14428 - NUCLEOLAR COMPLEX PROTEIN 3 Genomic Order:  7587
Name:  ? Bradi1g59970 Secondary Identifier:  ? PAC:32806100
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g59970 0.5kb upstream 0.5kb upstream 11878 true Bd1: 59229082-59240959 Brachypodium distachyon
Bradi1g59970 0.5kb upstream 0.5kb upstream 500 false Bd1: 59240460-59240959 Brachypodium distachyon
Bradi1g59970 0.5kb downstream 0.5kb downstream 11878 true Bd1: 59228582-59240459 Brachypodium distachyon
Bradi1g59970 0.5kb downstream 0.5kb downstream 500 false Bd1: 59228582-59229081 Brachypodium distachyon
Bradi1g59970 1.0kb upstream 1.0kb upstream 12378 true Bd1: 59229082-59241459 Brachypodium distachyon
Bradi1g59970 1.0kb upstream 1.0kb upstream 1000 false Bd1: 59240460-59241459 Brachypodium distachyon
Bradi1g59970 1.0kb downstream 1.0kb downstream 12378 true Bd1: 59228082-59240459 Brachypodium distachyon
Bradi1g59970 1.0kb downstream 1.0kb downstream 1000 false Bd1: 59228082-59229081 Brachypodium distachyon
Bradi1g59970 2.0kb upstream 2.0kb upstream 13378 true Bd1: 59229082-59242459 Brachypodium distachyon
Bradi1g59970 2.0kb upstream 2.0kb upstream 2000 false Bd1: 59240460-59242459 Brachypodium distachyon
Bradi1g59970 2.0kb downstream 2.0kb downstream 13378 true Bd1: 59227082-59240459 Brachypodium distachyon
Bradi1g59970 2.0kb downstream 2.0kb downstream 2000 false Bd1: 59227082-59229081 Brachypodium distachyon
Bradi1g59970 5.0kb upstream 5.0kb upstream 16378 true Bd1: 59229082-59245459 Brachypodium distachyon
Bradi1g59970 5.0kb upstream 5.0kb upstream 5000 false Bd1: 59240460-59245459 Brachypodium distachyon
Bradi1g59970 5.0kb downstream 5.0kb downstream 16378 true Bd1: 59224082-59240459 Brachypodium distachyon
Bradi1g59970 5.0kb downstream 5.0kb downstream 5000 false Bd1: 59224082-59229081 Brachypodium distachyon
Bradi1g59970 10.0kb upstream 10.0kb upstream 21378 true Bd1: 59229082-59250459 Brachypodium distachyon
Bradi1g59970 10.0kb upstream 10.0kb upstream 10000 false Bd1: 59240460-59250459 Brachypodium distachyon
Bradi1g59970 10.0kb downstream 10.0kb downstream 21378 true Bd1: 59219082-59240459 Brachypodium distachyon
Bradi1g59970 10.0kb downstream 10.0kb downstream 10000 false Bd1: 59219082-59229081 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580558 5269 Grass View MSA
122041726 5273 Angiosperm View MSA
121346572 5274 Embryophyte View MSA
123424637 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.684        
cufflinks 3.596        
cufflinks 3.02        
cufflinks 3.089        
cufflinks 0.782       Low
cufflinks 3.252        
cufflinks 2.904        
cufflinks 2.178        
cufflinks 3.067        
cufflinks 1.619        
cufflinks 1.464        
cufflinks 2.58        
cufflinks 0.889       Low
cufflinks 0.98       Low
cufflinks 1.606        
cufflinks 3.361        
cufflinks 1.902        
cufflinks 6.066       High
cufflinks 2.237        
cufflinks 0.181       Low
cufflinks 2.398        
cufflinks 2.053        
cufflinks 2.075        
cufflinks 2.319        
cufflinks 2.967        
cufflinks 1.964        
cufflinks 1.271        
cufflinks 1.871        
cufflinks 1.802        
cufflinks 3.448        

0 Strain