Gene : Bradi1g60540 B. distachyon v3.1
Defline:  (1 of 2) 1.14.99.3 - Heme oxygenase (biliverdin-producing) / Heme oxygenase (decyclizing) Genomic Order:  7666
Name:  ? Bradi1g60540 Secondary Identifier:  ? PAC:32805502
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5874 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g60540 0.5kb upstream 0.5kb upstream 4027 true Bd1: 60111549-60115575 Brachypodium distachyon
Bradi1g60540 0.5kb upstream 0.5kb upstream 500 false Bd1: 60111549-60112048 Brachypodium distachyon
Bradi1g60540 0.5kb downstream 0.5kb downstream 4027 true Bd1: 60112049-60116075 Brachypodium distachyon
Bradi1g60540 0.5kb downstream 0.5kb downstream 500 false Bd1: 60115576-60116075 Brachypodium distachyon
Bradi1g60540 1.0kb upstream 1.0kb upstream 4527 true Bd1: 60111049-60115575 Brachypodium distachyon
Bradi1g60540 1.0kb upstream 1.0kb upstream 1000 false Bd1: 60111049-60112048 Brachypodium distachyon
Bradi1g60540 1.0kb downstream 1.0kb downstream 4527 true Bd1: 60112049-60116575 Brachypodium distachyon
Bradi1g60540 1.0kb downstream 1.0kb downstream 1000 false Bd1: 60115576-60116575 Brachypodium distachyon
Bradi1g60540 2.0kb upstream 2.0kb upstream 5527 true Bd1: 60110049-60115575 Brachypodium distachyon
Bradi1g60540 2.0kb upstream 2.0kb upstream 2000 false Bd1: 60110049-60112048 Brachypodium distachyon
Bradi1g60540 2.0kb downstream 2.0kb downstream 5527 true Bd1: 60112049-60117575 Brachypodium distachyon
Bradi1g60540 2.0kb downstream 2.0kb downstream 2000 false Bd1: 60115576-60117575 Brachypodium distachyon
Bradi1g60540 5.0kb upstream 5.0kb upstream 8527 true Bd1: 60107049-60115575 Brachypodium distachyon
Bradi1g60540 5.0kb upstream 5.0kb upstream 5000 false Bd1: 60107049-60112048 Brachypodium distachyon
Bradi1g60540 5.0kb downstream 5.0kb downstream 8527 true Bd1: 60112049-60120575 Brachypodium distachyon
Bradi1g60540 5.0kb downstream 5.0kb downstream 5000 false Bd1: 60115576-60120575 Brachypodium distachyon
Bradi1g60540 10.0kb upstream 10.0kb upstream 13527 true Bd1: 60102049-60115575 Brachypodium distachyon
Bradi1g60540 10.0kb upstream 10.0kb upstream 10000 false Bd1: 60102049-60112048 Brachypodium distachyon
Bradi1g60540 10.0kb downstream 10.0kb downstream 13527 true Bd1: 60112049-60125575 Brachypodium distachyon
Bradi1g60540 10.0kb downstream 10.0kb downstream 10000 false Bd1: 60115576-60125575 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576446 5269 Grass View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.745        
cufflinks 8.229        
cufflinks 8.836       High
cufflinks 8.759       High
cufflinks 2.557       Low
cufflinks 6.786        
cufflinks 7.712        
cufflinks 5.064        
cufflinks 5.495        
cufflinks 8.752       High
cufflinks 4.612        
cufflinks 5.611        
cufflinks 3.377       Low
cufflinks 3.537       Low
cufflinks 3.408       Low
cufflinks 7.119        
cufflinks 6.817        
cufflinks 3.321       Low
cufflinks 6.186        
cufflinks 5.503        
cufflinks 5.028        
cufflinks 6.925        
cufflinks 3.826        
cufflinks 4.947        
cufflinks 6.932        
cufflinks 9.404       High
cufflinks 3.139       Low
cufflinks 9.369       High
cufflinks 7.884        
cufflinks 8.988       High

0 Strain