Gene : Bradi1g61590 B. distachyon v3.1
Defline:  (1 of 1) PTHR10516:SF268 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 Genomic Order:  7805
Name:  ? Bradi1g61590 Secondary Identifier:  ? PAC:32803258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g61590 0.5kb upstream 0.5kb upstream 13682 true Bd1: 61150906-61164587 Brachypodium distachyon
Bradi1g61590 0.5kb upstream 0.5kb upstream 500 false Bd1: 61164088-61164587 Brachypodium distachyon
Bradi1g61590 0.5kb downstream 0.5kb downstream 13682 true Bd1: 61150406-61164087 Brachypodium distachyon
Bradi1g61590 0.5kb downstream 0.5kb downstream 500 false Bd1: 61150406-61150905 Brachypodium distachyon
Bradi1g61590 1.0kb upstream 1.0kb upstream 14182 true Bd1: 61150906-61165087 Brachypodium distachyon
Bradi1g61590 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61164088-61165087 Brachypodium distachyon
Bradi1g61590 1.0kb downstream 1.0kb downstream 14182 true Bd1: 61149906-61164087 Brachypodium distachyon
Bradi1g61590 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61149906-61150905 Brachypodium distachyon
Bradi1g61590 2.0kb upstream 2.0kb upstream 15182 true Bd1: 61150906-61166087 Brachypodium distachyon
Bradi1g61590 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61164088-61166087 Brachypodium distachyon
Bradi1g61590 2.0kb downstream 2.0kb downstream 15182 true Bd1: 61148906-61164087 Brachypodium distachyon
Bradi1g61590 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61148906-61150905 Brachypodium distachyon
Bradi1g61590 5.0kb upstream 5.0kb upstream 18182 true Bd1: 61150906-61169087 Brachypodium distachyon
Bradi1g61590 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61164088-61169087 Brachypodium distachyon
Bradi1g61590 5.0kb downstream 5.0kb downstream 18182 true Bd1: 61145906-61164087 Brachypodium distachyon
Bradi1g61590 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61145906-61150905 Brachypodium distachyon
Bradi1g61590 10.0kb upstream 10.0kb upstream 23182 true Bd1: 61150906-61174087 Brachypodium distachyon
Bradi1g61590 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61164088-61174087 Brachypodium distachyon
Bradi1g61590 10.0kb downstream 10.0kb downstream 23182 true Bd1: 61140906-61164087 Brachypodium distachyon
Bradi1g61590 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61140906-61150905 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569427 5269 Grass View MSA
122041915 5273 Angiosperm View MSA
121346304 5274 Embryophyte View MSA
123424056 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.956        
cufflinks 2.991        
cufflinks 3.071        
cufflinks 2.852        
cufflinks 2.833        
cufflinks 3.013        
cufflinks 2.695        
cufflinks 2.859        
cufflinks 3.119        
cufflinks 3.177        
cufflinks 2.058       Low
cufflinks 3.41        
cufflinks 2.148       Low
cufflinks 1.666       Low
cufflinks 2.749        
cufflinks 3.195        
cufflinks 3.039        
cufflinks 4.862       High
cufflinks 4.454       High
cufflinks 1.551       Low
cufflinks 2.264        
cufflinks 3.711       High
cufflinks 2.857        
cufflinks 2.874        
cufflinks 2.767        
cufflinks 3.008        
cufflinks 2.418        
cufflinks 3.06        
cufflinks 3.098        
cufflinks 3.287        

0 Strain