Gene : Bradi1g61610 B. distachyon v3.1
Defline:  (1 of 5) PTHR13989 - REPLICATION PROTEIN A-RELATED Genomic Order:  7806
Name:  ? Bradi1g61610 Secondary Identifier:  ? PAC:32803376
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g61610 0.5kb upstream 0.5kb upstream 4770 true Bd1: 61168150-61172919 Brachypodium distachyon
Bradi1g61610 0.5kb upstream 0.5kb upstream 500 false Bd1: 61168150-61168649 Brachypodium distachyon
Bradi1g61610 0.5kb downstream 0.5kb downstream 4770 true Bd1: 61168650-61173419 Brachypodium distachyon
Bradi1g61610 0.5kb downstream 0.5kb downstream 500 false Bd1: 61172920-61173419 Brachypodium distachyon
Bradi1g61610 1.0kb upstream 1.0kb upstream 5270 true Bd1: 61167650-61172919 Brachypodium distachyon
Bradi1g61610 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61167650-61168649 Brachypodium distachyon
Bradi1g61610 1.0kb downstream 1.0kb downstream 5270 true Bd1: 61168650-61173919 Brachypodium distachyon
Bradi1g61610 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61172920-61173919 Brachypodium distachyon
Bradi1g61610 2.0kb upstream 2.0kb upstream 6270 true Bd1: 61166650-61172919 Brachypodium distachyon
Bradi1g61610 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61166650-61168649 Brachypodium distachyon
Bradi1g61610 2.0kb downstream 2.0kb downstream 6270 true Bd1: 61168650-61174919 Brachypodium distachyon
Bradi1g61610 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61172920-61174919 Brachypodium distachyon
Bradi1g61610 5.0kb upstream 5.0kb upstream 9270 true Bd1: 61163650-61172919 Brachypodium distachyon
Bradi1g61610 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61163650-61168649 Brachypodium distachyon
Bradi1g61610 5.0kb downstream 5.0kb downstream 9270 true Bd1: 61168650-61177919 Brachypodium distachyon
Bradi1g61610 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61172920-61177919 Brachypodium distachyon
Bradi1g61610 10.0kb upstream 10.0kb upstream 14270 true Bd1: 61158650-61172919 Brachypodium distachyon
Bradi1g61610 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61158650-61168649 Brachypodium distachyon
Bradi1g61610 10.0kb downstream 10.0kb downstream 14270 true Bd1: 61168650-61182919 Brachypodium distachyon
Bradi1g61610 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61172920-61182919 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583404 5269 Grass View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106       Low
cufflinks 0.274        
cufflinks 0.263        
cufflinks 0.193        
cufflinks 0.129        
cufflinks 0.312        
cufflinks 0.294        
cufflinks 0.375        
cufflinks 0.29        
cufflinks 0.194        
cufflinks 0.217        
cufflinks 0.298        
cufflinks 0.239        
cufflinks 0.255        
cufflinks 0.188        
cufflinks 0.286        
cufflinks 0.209        
cufflinks 0.288        
cufflinks 0.192     Low  
cufflinks 0.121     Low  
cufflinks 0.278        
cufflinks 0.284        
cufflinks 0.388        
cufflinks 0.327        
cufflinks 0.29        
cufflinks 0.209        
cufflinks 0.222        
cufflinks 0.231        
cufflinks 0.276        
cufflinks 0.225        

0 Strain