Gene : Bradi1g61930 B. distachyon v3.1
Defline:  (1 of 1) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  7841
Name:  ? Bradi1g61930 Secondary Identifier:  ? PAC:32796828
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon DETOX1-PWY-1 Brachypodium distachyon pathologic  
Bdistachyon PWY-4081 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g61930 0.5kb upstream 0.5kb upstream 3491 true Bd1: 61423614-61427104 Brachypodium distachyon
Bradi1g61930 0.5kb upstream 0.5kb upstream 500 false Bd1: 61426605-61427104 Brachypodium distachyon
Bradi1g61930 0.5kb downstream 0.5kb downstream 3491 true Bd1: 61423114-61426604 Brachypodium distachyon
Bradi1g61930 0.5kb downstream 0.5kb downstream 500 false Bd1: 61423114-61423613 Brachypodium distachyon
Bradi1g61930 1.0kb upstream 1.0kb upstream 3991 true Bd1: 61423614-61427604 Brachypodium distachyon
Bradi1g61930 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61426605-61427604 Brachypodium distachyon
Bradi1g61930 1.0kb downstream 1.0kb downstream 3991 true Bd1: 61422614-61426604 Brachypodium distachyon
Bradi1g61930 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61422614-61423613 Brachypodium distachyon
Bradi1g61930 2.0kb upstream 2.0kb upstream 4991 true Bd1: 61423614-61428604 Brachypodium distachyon
Bradi1g61930 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61426605-61428604 Brachypodium distachyon
Bradi1g61930 2.0kb downstream 2.0kb downstream 4991 true Bd1: 61421614-61426604 Brachypodium distachyon
Bradi1g61930 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61421614-61423613 Brachypodium distachyon
Bradi1g61930 5.0kb upstream 5.0kb upstream 7991 true Bd1: 61423614-61431604 Brachypodium distachyon
Bradi1g61930 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61426605-61431604 Brachypodium distachyon
Bradi1g61930 5.0kb downstream 5.0kb downstream 7991 true Bd1: 61418614-61426604 Brachypodium distachyon
Bradi1g61930 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61418614-61423613 Brachypodium distachyon
Bradi1g61930 10.0kb upstream 10.0kb upstream 12991 true Bd1: 61423614-61436604 Brachypodium distachyon
Bradi1g61930 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61426605-61436604 Brachypodium distachyon
Bradi1g61930 10.0kb downstream 10.0kb downstream 12991 true Bd1: 61413614-61426604 Brachypodium distachyon
Bradi1g61930 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61413614-61423613 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
124577446 5269 Grass View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.074     High  
cufflinks 21.095     High  
cufflinks 32.216     High High
cufflinks 20.588     High  
cufflinks 20.582     High  
cufflinks 16.247     High Low
cufflinks 18.052     High  
cufflinks 14.59     High Low
cufflinks 15.664     High Low
cufflinks 23.488     High  
cufflinks 34.907     High High
cufflinks 20.997     High  
cufflinks 25.092     High  
cufflinks 25.509     High  
cufflinks 23.367     High  
cufflinks 18.548     High  
cufflinks 21.72     High  
cufflinks 15.495     High Low
cufflinks 38.07     High High
cufflinks 27.342     High  
cufflinks 20.51     High  
cufflinks 24.907     High  
cufflinks 15.114     High Low
cufflinks 17.897     High  
cufflinks 16.456     High Low
cufflinks 32.739     High High
cufflinks 27.604     High  
cufflinks 31.643     High High
cufflinks 28.072     High  
cufflinks 23.994     High  

0 Strain