Gene : Bradi1g67420 B. distachyon v3.1
Defline:  (1 of 1) PTHR23086//PTHR23086:SF40 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // SUBFAMILY NOT NAMED Genomic Order:  8525
Name:  ? Bradi1g67420 Secondary Identifier:  ? PAC:32806456
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6351 Brachypodium distachyon pathologic  
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g67420 0.5kb upstream 0.5kb upstream 5850 true Bd1: 66299723-66305572 Brachypodium distachyon
Bradi1g67420 0.5kb upstream 0.5kb upstream 500 false Bd1: 66305073-66305572 Brachypodium distachyon
Bradi1g67420 0.5kb downstream 0.5kb downstream 5850 true Bd1: 66299223-66305072 Brachypodium distachyon
Bradi1g67420 0.5kb downstream 0.5kb downstream 500 false Bd1: 66299223-66299722 Brachypodium distachyon
Bradi1g67420 1.0kb upstream 1.0kb upstream 6350 true Bd1: 66299723-66306072 Brachypodium distachyon
Bradi1g67420 1.0kb upstream 1.0kb upstream 1000 false Bd1: 66305073-66306072 Brachypodium distachyon
Bradi1g67420 1.0kb downstream 1.0kb downstream 6350 true Bd1: 66298723-66305072 Brachypodium distachyon
Bradi1g67420 1.0kb downstream 1.0kb downstream 1000 false Bd1: 66298723-66299722 Brachypodium distachyon
Bradi1g67420 2.0kb upstream 2.0kb upstream 7350 true Bd1: 66299723-66307072 Brachypodium distachyon
Bradi1g67420 2.0kb upstream 2.0kb upstream 2000 false Bd1: 66305073-66307072 Brachypodium distachyon
Bradi1g67420 2.0kb downstream 2.0kb downstream 7350 true Bd1: 66297723-66305072 Brachypodium distachyon
Bradi1g67420 2.0kb downstream 2.0kb downstream 2000 false Bd1: 66297723-66299722 Brachypodium distachyon
Bradi1g67420 5.0kb upstream 5.0kb upstream 10350 true Bd1: 66299723-66310072 Brachypodium distachyon
Bradi1g67420 5.0kb upstream 5.0kb upstream 5000 false Bd1: 66305073-66310072 Brachypodium distachyon
Bradi1g67420 5.0kb downstream 5.0kb downstream 10350 true Bd1: 66294723-66305072 Brachypodium distachyon
Bradi1g67420 5.0kb downstream 5.0kb downstream 5000 false Bd1: 66294723-66299722 Brachypodium distachyon
Bradi1g67420 10.0kb upstream 10.0kb upstream 15350 true Bd1: 66299723-66315072 Brachypodium distachyon
Bradi1g67420 10.0kb upstream 10.0kb upstream 10000 false Bd1: 66305073-66315072 Brachypodium distachyon
Bradi1g67420 10.0kb downstream 10.0kb downstream 15350 true Bd1: 66289723-66305072 Brachypodium distachyon
Bradi1g67420 10.0kb downstream 10.0kb downstream 10000 false Bd1: 66289723-66299722 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
124588367 5269 Grass View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.18        
cufflinks 0.47        
cufflinks 0.425        
cufflinks 0.358        
cufflinks 0.112        
cufflinks 0.375        
cufflinks 0.352        
cufflinks 0.268        
cufflinks 0.295        
cufflinks 0.267        
cufflinks 0.029     Low Low
cufflinks 0.293        
cufflinks 0.043     Low Low
cufflinks 0.019     Low Low
cufflinks 0.093        
cufflinks 0.373        
cufflinks 0.134     Low  
cufflinks 0.493        
cufflinks 0.3        
cufflinks 0.025     Low Low
cufflinks 0.426        
cufflinks 0.403        
cufflinks 0.247        
cufflinks 0.266        
cufflinks 0.282        
cufflinks 0.422        
cufflinks 0.016     Low Low
cufflinks 0.401        
cufflinks 0.32        
cufflinks 0.528       High

0 Strain