Gene : Bradi1g68940 B. distachyon v3.1
Defline:  (1 of 2) K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) Genomic Order:  8723
Name:  ? Bradi1g68940 Secondary Identifier:  ? PAC:32792072
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g68940 0.5kb upstream 0.5kb upstream 2943 true Bd1: 67609996-67612938 Brachypodium distachyon
Bradi1g68940 0.5kb upstream 0.5kb upstream 500 false Bd1: 67609996-67610495 Brachypodium distachyon
Bradi1g68940 0.5kb downstream 0.5kb downstream 2943 true Bd1: 67610496-67613438 Brachypodium distachyon
Bradi1g68940 0.5kb downstream 0.5kb downstream 500 false Bd1: 67612939-67613438 Brachypodium distachyon
Bradi1g68940 1.0kb upstream 1.0kb upstream 3443 true Bd1: 67609496-67612938 Brachypodium distachyon
Bradi1g68940 1.0kb upstream 1.0kb upstream 1000 false Bd1: 67609496-67610495 Brachypodium distachyon
Bradi1g68940 1.0kb downstream 1.0kb downstream 3443 true Bd1: 67610496-67613938 Brachypodium distachyon
Bradi1g68940 1.0kb downstream 1.0kb downstream 1000 false Bd1: 67612939-67613938 Brachypodium distachyon
Bradi1g68940 2.0kb upstream 2.0kb upstream 4443 true Bd1: 67608496-67612938 Brachypodium distachyon
Bradi1g68940 2.0kb upstream 2.0kb upstream 2000 false Bd1: 67608496-67610495 Brachypodium distachyon
Bradi1g68940 2.0kb downstream 2.0kb downstream 4443 true Bd1: 67610496-67614938 Brachypodium distachyon
Bradi1g68940 2.0kb downstream 2.0kb downstream 2000 false Bd1: 67612939-67614938 Brachypodium distachyon
Bradi1g68940 5.0kb upstream 5.0kb upstream 7443 true Bd1: 67605496-67612938 Brachypodium distachyon
Bradi1g68940 5.0kb upstream 5.0kb upstream 5000 false Bd1: 67605496-67610495 Brachypodium distachyon
Bradi1g68940 5.0kb downstream 5.0kb downstream 7443 true Bd1: 67610496-67617938 Brachypodium distachyon
Bradi1g68940 5.0kb downstream 5.0kb downstream 5000 false Bd1: 67612939-67617938 Brachypodium distachyon
Bradi1g68940 10.0kb upstream 10.0kb upstream 12443 true Bd1: 67600496-67612938 Brachypodium distachyon
Bradi1g68940 10.0kb upstream 10.0kb upstream 10000 false Bd1: 67600496-67610495 Brachypodium distachyon
Bradi1g68940 10.0kb downstream 10.0kb downstream 12443 true Bd1: 67610496-67622938 Brachypodium distachyon
Bradi1g68940 10.0kb downstream 10.0kb downstream 10000 false Bd1: 67612939-67622938 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575846 5269 Grass View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.593     High  
cufflinks 88.679     High  
cufflinks 75.231     High  
cufflinks 75.647     High  
cufflinks 60.879     High  
cufflinks 74.58     High  
cufflinks 86.466     High  
cufflinks 66.219     High  
cufflinks 63.998     High  
cufflinks 74.419     High  
cufflinks 10.359     High Low
cufflinks 58.271     High  
cufflinks 7.987     High Low
cufflinks 8.415     High Low
cufflinks 30.644     High  
cufflinks 87.415     High  
cufflinks 115.614     High  
cufflinks 150.073     High High
cufflinks 106.435     High  
cufflinks 23.541     High Low
cufflinks 106.375     High  
cufflinks 58.676     High  
cufflinks 53.209     High  
cufflinks 52.865     High  
cufflinks 72.69     High  
cufflinks 68.351     High  
cufflinks 9.781     High Low
cufflinks 60.692     High  
cufflinks 61.453     High  
cufflinks 105.596     High  

0 Strain