Gene : Bradi1g64360 B. distachyon v3.1
Defline:  (1 of 1) K12121 - phytochrome B (PHYB) Genomic Order:  8140
Name:  ? Bradi1g64360 Secondary Identifier:  ? PAC:32795041
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64360 0.5kb upstream 0.5kb upstream 8946 true Bd1: 63771093-63780038 Brachypodium distachyon
Bradi1g64360 0.5kb upstream 0.5kb upstream 500 false Bd1: 63779539-63780038 Brachypodium distachyon
Bradi1g64360 0.5kb downstream 0.5kb downstream 8946 true Bd1: 63770593-63779538 Brachypodium distachyon
Bradi1g64360 0.5kb downstream 0.5kb downstream 500 false Bd1: 63770593-63771092 Brachypodium distachyon
Bradi1g64360 1.0kb upstream 1.0kb upstream 9446 true Bd1: 63771093-63780538 Brachypodium distachyon
Bradi1g64360 1.0kb upstream 1.0kb upstream 1000 false Bd1: 63779539-63780538 Brachypodium distachyon
Bradi1g64360 1.0kb downstream 1.0kb downstream 9446 true Bd1: 63770093-63779538 Brachypodium distachyon
Bradi1g64360 1.0kb downstream 1.0kb downstream 1000 false Bd1: 63770093-63771092 Brachypodium distachyon
Bradi1g64360 2.0kb upstream 2.0kb upstream 10446 true Bd1: 63771093-63781538 Brachypodium distachyon
Bradi1g64360 2.0kb upstream 2.0kb upstream 2000 false Bd1: 63779539-63781538 Brachypodium distachyon
Bradi1g64360 2.0kb downstream 2.0kb downstream 10446 true Bd1: 63769093-63779538 Brachypodium distachyon
Bradi1g64360 2.0kb downstream 2.0kb downstream 2000 false Bd1: 63769093-63771092 Brachypodium distachyon
Bradi1g64360 5.0kb upstream 5.0kb upstream 13446 true Bd1: 63771093-63784538 Brachypodium distachyon
Bradi1g64360 5.0kb upstream 5.0kb upstream 5000 false Bd1: 63779539-63784538 Brachypodium distachyon
Bradi1g64360 5.0kb downstream 5.0kb downstream 13446 true Bd1: 63766093-63779538 Brachypodium distachyon
Bradi1g64360 5.0kb downstream 5.0kb downstream 5000 false Bd1: 63766093-63771092 Brachypodium distachyon
Bradi1g64360 10.0kb upstream 10.0kb upstream 18446 true Bd1: 63771093-63789538 Brachypodium distachyon
Bradi1g64360 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63779539-63789538 Brachypodium distachyon
Bradi1g64360 10.0kb downstream 10.0kb downstream 18446 true Bd1: 63761093-63779538 Brachypodium distachyon
Bradi1g64360 10.0kb downstream 10.0kb downstream 10000 false Bd1: 63761093-63771092 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570607 5269 Grass View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13        
cufflinks 4.712        
cufflinks 5.484       High
cufflinks 3.402        
cufflinks 6.19       High
cufflinks 4.665        
cufflinks 4.338        
cufflinks 4.592        
cufflinks 4.193        
cufflinks 2.686        
cufflinks 5.385        
cufflinks 7.031       High
cufflinks 3.642        
cufflinks 3.43        
cufflinks 3.232        
cufflinks 5.106        
cufflinks 2.593        
cufflinks 3.188        
cufflinks 2.779        
cufflinks 3.708        
cufflinks 3.674        
cufflinks 5.304        
cufflinks 4.423        
cufflinks 3.532        
cufflinks 3.433        
cufflinks 4.242        
cufflinks 3.914        
cufflinks 4.357        
cufflinks 4.627        
cufflinks 6.944       High

0 Strain