Protein Family : phytochrome B 121350342

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  165

165 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29693.t000114 (1 of 1) K12123 - phytochrome E (PHYE) R. communis v0.1 4487   29693: 779347-783833
29889.t000067 (1 of 1) K12121 - phytochrome B (PHYB) R. communis v0.1 6735   29889: 292112-298846
Cucsa.100300 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. sativus v1.0 5627   scaffold00926: 840316-845942
Cucsa.212560 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sativus v1.0 10337   scaffold01543: 349934-360270
Cucsa.252520 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sativus v1.0 5590   scaffold02229: 1438440-1444029
orange1.1g001215m.g (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. sinensis v1.1 5873   scaffold00859: 11941-17813
orange1.1g001210m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sinensis v1.1 5310   scaffold00007: 1268124-1273433
orange1.1g037299m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sinensis v1.1 6009   scaffold00016: 990517-996525
AT4G16250 (1 of 1) K12122 - phytochrome D (PHYD) A. thaliana TAIR10 PHYD 3885   Chr4: 9195602-9199486
AT4G18130 (1 of 1) K12123 - phytochrome E (PHYE) A. thaliana TAIR10 PHYE 3946   Chr4: 10042137-10046082
AT5G35840 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C A. thaliana TAIR10 PHYC 3939   Chr5: 14007826-14011764
AT2G18790 (1 of 1) K12121 - phytochrome B (PHYB) A. thaliana TAIR10 PHYB 4550   Chr2: 8139881-8144430
Thhalv10024253m.g (1 of 1) PF00360//PF00512//PF00989//PF01590//PF02518//PF08446 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_2) E. salsugineum v1.0 4230   scaffold_1: 10830637-10834866
Thhalv10024375m.g (1 of 1) PF00360//PF00512//PF00989//PF01590//PF02518 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) E. salsugineum v1.0 3746   scaffold_1: 9625898-9629643
Thhalv10003554m.g (1 of 1) PTHR24423:SF493 - PHYTOCHROME C E. salsugineum v1.0 3859   scaffold_6: 8744906-8748764
Ciclev10014092m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. clementina v1.0 6344   scaffold_2: 34780711-34787054
Ciclev10014096m.g (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. clementina v1.0 5798   scaffold_2: 24302053-24307850
Ciclev10004218m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. clementina v1.0 6479   scaffold_9: 827118-833596
Lus10006389.g (1 of 3) PTHR24423:SF493 - PHYTOCHROME C L. usitatissimum v1.0 3726   scaffold1603: 172560-176285
Lus10016911.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4396   scaffold153: 580863-585258
Lus10037771.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4373   scaffold196: 1468583-1472955
Lus10012342.g (1 of 3) PTHR24423:SF493 - PHYTOCHROME C L. usitatissimum v1.0 3683   scaffold572: 231900-235582
Lus10011967.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 3535   scaffold931: 9886-13420
Gorai.007G166300 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C G. raimondii v2.1 16887   Chr07: 14686329-14703215
Gorai.011G200200 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E G. raimondii v2.1 5999   Chr11: 48430597-48436595
Gorai.011G040900 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E G. raimondii v2.1 4509   Chr11: 3037284-3041792
Thecc1EG002400 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C T. cacao v1.1 7110   scaffold_1: 13649974-13657083
Thecc1EG021372 (1 of 1) K12121 - phytochrome B (PHYB) T. cacao v1.1 7351   scaffold_4: 32790761-32798111
Thecc1EG029563 (1 of 1) K12123 - phytochrome E (PHYE) T. cacao v1.1 8344   scaffold_6: 23203964-23212307
Migut.H01380 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. guttatus v2.0 4453   scaffold_8: 15813662-15818114

165 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29889.m003301 R. communis v0.1 121350342 phytochrome B 2 5274 Embryophyte
29693.m002076 R. communis v0.1 121350342 phytochrome B 2 5274 Embryophyte
Cucsa.100300.1 C. sativus v1.0 121350342 phytochrome B 3 5274 Embryophyte
Cucsa.212560.1 C. sativus v1.0 121350342 phytochrome B 3 5274 Embryophyte
Cucsa.252520.1 C. sativus v1.0 121350342 phytochrome B 3 5274 Embryophyte
orange1.1g001215m C. sinensis v1.1 121350342 phytochrome B 3 5274 Embryophyte
orange1.1g037299m C. sinensis v1.1 121350342 phytochrome B 3 5274 Embryophyte
orange1.1g001210m C. sinensis v1.1 121350342 phytochrome B 3 5274 Embryophyte
AT5G35840.1 A. thaliana TAIR10 121350342 phytochrome B 4 5274 Embryophyte
AT2G18790.1 A. thaliana TAIR10 121350342 phytochrome B 4 5274 Embryophyte
AT4G18130.1 A. thaliana TAIR10 121350342 phytochrome B 4 5274 Embryophyte
AT4G16250.1 A. thaliana TAIR10 121350342 phytochrome B 4 5274 Embryophyte
Thhalv10024375m E. salsugineum v1.0 121350342 phytochrome B 3 5274 Embryophyte
Thhalv10003554m E. salsugineum v1.0 121350342 phytochrome B 3 5274 Embryophyte
Thhalv10024253m E. salsugineum v1.0 121350342 phytochrome B 3 5274 Embryophyte
Ciclev10004218m C. clementina v1.0 121350342 phytochrome B 3 5274 Embryophyte
Ciclev10014092m C. clementina v1.0 121350342 phytochrome B 3 5274 Embryophyte
Ciclev10014096m C. clementina v1.0 121350342 phytochrome B 3 5274 Embryophyte
Lus10011967 L. usitatissimum v1.0 121350342 phytochrome B 5 5274 Embryophyte
Lus10006389 L. usitatissimum v1.0 121350342 phytochrome B 5 5274 Embryophyte
Lus10012342 L. usitatissimum v1.0 121350342 phytochrome B 5 5274 Embryophyte
Lus10037771 L. usitatissimum v1.0 121350342 phytochrome B 5 5274 Embryophyte
Lus10016911 L. usitatissimum v1.0 121350342 phytochrome B 5 5274 Embryophyte
Gorai.011G200200.1 G. raimondii v2.1 121350342 phytochrome B 3 5274 Embryophyte
Gorai.007G166300.1 G. raimondii v2.1 121350342 phytochrome B 3 5274 Embryophyte
Gorai.011G040900.1 G. raimondii v2.1 121350342 phytochrome B 3 5274 Embryophyte
Thecc1EG029563t1 T. cacao v1.1 121350342 phytochrome B 3 5274 Embryophyte
Thecc1EG002400t1 T. cacao v1.1 121350342 phytochrome B 3 5274 Embryophyte
Thecc1EG021372t1 T. cacao v1.1 121350342 phytochrome B 3 5274 Embryophyte
Migut.H01380.1.p M. guttatus v2.0 121350342 phytochrome B 3 5274 Embryophyte