Gene : Cucsa.252520 C. sativus v1.0
Defline:  (1 of 2) PTHR24423:SF563 - PHYTOCHROME E Genomic Order:  168
Name:  ? Cucsa.252520 Secondary Identifier:  ? PAC:16971956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.252520 0.5kb upstream 0.5kb upstream 6090 true scaffold02229: 1438440-1444529 Cucumis sativus
Cucsa.252520 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 1444030-1444529 Cucumis sativus
Cucsa.252520 0.5kb downstream 0.5kb downstream 6090 true scaffold02229: 1437940-1444029 Cucumis sativus
Cucsa.252520 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 1437940-1438439 Cucumis sativus
Cucsa.252520 1.0kb upstream 1.0kb upstream 6590 true scaffold02229: 1438440-1445029 Cucumis sativus
Cucsa.252520 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 1444030-1445029 Cucumis sativus
Cucsa.252520 1.0kb downstream 1.0kb downstream 6590 true scaffold02229: 1437440-1444029 Cucumis sativus
Cucsa.252520 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 1437440-1438439 Cucumis sativus
Cucsa.252520 2.0kb upstream 2.0kb upstream 7590 true scaffold02229: 1438440-1446029 Cucumis sativus
Cucsa.252520 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 1444030-1446029 Cucumis sativus
Cucsa.252520 2.0kb downstream 2.0kb downstream 7590 true scaffold02229: 1436440-1444029 Cucumis sativus
Cucsa.252520 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 1436440-1438439 Cucumis sativus
Cucsa.252520 5.0kb upstream 5.0kb upstream 10590 true scaffold02229: 1438440-1449029 Cucumis sativus
Cucsa.252520 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 1444030-1449029 Cucumis sativus
Cucsa.252520 5.0kb downstream 5.0kb downstream 10590 true scaffold02229: 1433440-1444029 Cucumis sativus
Cucsa.252520 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 1433440-1438439 Cucumis sativus
Cucsa.252520 10.0kb upstream 10.0kb upstream 15590 true scaffold02229: 1438440-1454029 Cucumis sativus
Cucsa.252520 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 1444030-1454029 Cucumis sativus
Cucsa.252520 10.0kb downstream 10.0kb downstream 15590 true scaffold02229: 1428440-1444029 Cucumis sativus
Cucsa.252520 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 1428440-1438439 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308488 5265 Fabidae View MSA
124065248 5270 Rosid View MSA
123737518 5271 Pentapetalae View MSA
122797861 5272 Eudicot View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain