Protein Family : phytochrome B 122797861

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  91
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91 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29693.t000114 (1 of 1) K12123 - phytochrome E (PHYE) R. communis v0.1 4487   29693: 779347-783833
29889.t000067 (1 of 1) K12121 - phytochrome B (PHYB) R. communis v0.1 6735   29889: 292112-298846
Cucsa.212560 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sativus v1.0 10337   scaffold01543: 349934-360270
Cucsa.252520 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sativus v1.0 5590   scaffold02229: 1438440-1444029
orange1.1g001210m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sinensis v1.1 5310   scaffold00007: 1268124-1273433
orange1.1g037299m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sinensis v1.1 6009   scaffold00016: 990517-996525
AT4G16250 (1 of 1) K12122 - phytochrome D (PHYD) A. thaliana TAIR10 PHYD 3885   Chr4: 9195602-9199486
AT4G18130 (1 of 1) K12123 - phytochrome E (PHYE) A. thaliana TAIR10 PHYE 3946   Chr4: 10042137-10046082
AT2G18790 (1 of 1) K12121 - phytochrome B (PHYB) A. thaliana TAIR10 PHYB 4550   Chr2: 8139881-8144430
Thhalv10024253m.g (1 of 1) PF00360//PF00512//PF00989//PF01590//PF02518//PF08446 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_2) E. salsugineum v1.0 4230   scaffold_1: 10830637-10834866
Thhalv10024375m.g (1 of 1) PF00360//PF00512//PF00989//PF01590//PF02518 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) E. salsugineum v1.0 3746   scaffold_1: 9625898-9629643
Ciclev10014092m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. clementina v1.0 6344   scaffold_2: 34780711-34787054
Ciclev10004218m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. clementina v1.0 6479   scaffold_9: 827118-833596
Lus10016911.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4396   scaffold153: 580863-585258
Lus10037771.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4373   scaffold196: 1468583-1472955
Lus10011967.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 3535   scaffold931: 9886-13420
Gorai.011G200200 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E G. raimondii v2.1 5999   Chr11: 48430597-48436595
Gorai.011G040900 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E G. raimondii v2.1 4509   Chr11: 3037284-3041792
Thecc1EG021372 (1 of 1) K12121 - phytochrome B (PHYB) T. cacao v1.1 7351   scaffold_4: 32790761-32798111
Thecc1EG029563 (1 of 1) K12123 - phytochrome E (PHYE) T. cacao v1.1 8344   scaffold_6: 23203964-23212307
Migut.H01380 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. guttatus v2.0 4453   scaffold_8: 15813662-15818114
Migut.N00041 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. guttatus v2.0 4751   scaffold_14: 180218-184968
Araha.15242s0010 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 3765   Scaffold15242: 39490-43254
Araha.17195s0001 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 4522   Scaffold17195: 38-4559
Araha.23460s0001 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 3925   Scaffold23460: 331-4255
Cagra.0389s0013 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 4563   Scaffold389: 48878-53440
Cagra.1595s0011 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 3823   Scaffold1595: 51644-55466
Cagra.3528s0020 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 4380   Scaffold3528: 77812-82191
Glyma.09G035500 (1 of 4) PTHR24423:SF563 - PHYTOCHROME E G. max Wm82.a2.v1 6835   Chr09: 2960395-2967229
Glyma.09G088500 (1 of 4) PTHR24423:SF563 - PHYTOCHROME E G. max Wm82.a2.v1 6358   Chr09: 11694597-11700954

91 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29693.m002076 R. communis v0.1 122797861 phytochrome B 2 5272 Eudicot
orange1.1g037299m C. sinensis v1.1 122797861 phytochrome B 2 5272 Eudicot
orange1.1g001210m C. sinensis v1.1 122797861 phytochrome B 2 5272 Eudicot
AT4G16250.1 A. thaliana TAIR10 122797861 phytochrome B 3 5272 Eudicot
Ciclev10014092m C. clementina v1.0 122797861 phytochrome B 2 5272 Eudicot
Lus10037771 L. usitatissimum v1.0 122797861 phytochrome B 3 5272 Eudicot
Gorai.011G040900.1 G. raimondii v2.1 122797861 phytochrome B 2 5272 Eudicot
Gorai.011G200200.1 G. raimondii v2.1 122797861 phytochrome B 2 5272 Eudicot
Thecc1EG029563t1 T. cacao v1.1 122797861 phytochrome B 2 5272 Eudicot
Thecc1EG021372t1 T. cacao v1.1 122797861 phytochrome B 2 5272 Eudicot
Migut.N00041.1.p M. guttatus v2.0 122797861 phytochrome B 2 5272 Eudicot
Migut.H01380.1.p M. guttatus v2.0 122797861 phytochrome B 2 5272 Eudicot
Glyma.09G088500.1.p G. max Wm82.a2.v1 122797861 phytochrome B 3 5272 Eudicot
Glyma.09G035500.1.p G. max Wm82.a2.v1 122797861 phytochrome B 3 5272 Eudicot
Medtr2g034040.1 M. truncatula Mt4.0v1 122797861 phytochrome B 2 5272 Eudicot
SapurV1A.0050s0370.1.p S. purpurea v1.0 122797861 phytochrome B 2 5272 Eudicot
SapurV1A.0114s0100.1.p S. purpurea v1.0 122797861 phytochrome B 2 5272 Eudicot
Eucgr.D00342.1.p E. grandis v2.0 122797861 phytochrome B 2 5272 Eudicot
Prupe.4G073900.1.p P. persica v2.1 122797861 phytochrome B 2 5272 Eudicot
Prupe.1G117000.1.p P. persica v2.1 122797861 phytochrome B 2 5272 Eudicot
Manes.15G117200.1.p M. esculenta v6.1 122797861 phytochrome B 2 5272 Eudicot
Manes.03G205100.1.p M. esculenta v6.1 122797861 phytochrome B 2 5272 Eudicot
Kalax.0391s0019.1.p K. laxiflora v1.1 122797861 phytochrome B 3 5272 Eudicot
Kalax.0010s0206.1.p K. laxiflora v1.1 122797861 phytochrome B 3 5272 Eudicot
Aqcoe6G045100.1.p A. coerulea v3.1 122797861 phytochrome B 2 5272 Eudicot
Aqcoe4G016500.1.p A. coerulea v3.1 122797861 phytochrome B 2 5272 Eudicot
Kaladp0053s0072.1.p K. fedtschenkoi v1.1 122797861 phytochrome B 1 5272 Eudicot
AUR62016209-RA C. quinoa v1.0 122797861 phytochrome B 3 5272 Eudicot
AUR62029114-RA C. quinoa v1.0 122797861 phytochrome B 3 5272 Eudicot
AUR62039279-RA C. quinoa v1.0 122797861 phytochrome B 3 5272 Eudicot