Gene : Cagra.1595s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24423:SF563 - PHYTOCHROME E Genomic Order:  11
Name:  ? Cagra.1595s0011 Secondary Identifier:  ? PAC:28895472
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1595s0011 0.5kb upstream 0.5kb upstream 4323 true Scaffold1595: 51644-55966 Capsella grandiflora
Cagra.1595s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1595: 55467-55966 Capsella grandiflora
Cagra.1595s0011 0.5kb downstream 0.5kb downstream 4323 true Scaffold1595: 51144-55466 Capsella grandiflora
Cagra.1595s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1595: 51144-51643 Capsella grandiflora
Cagra.1595s0011 1.0kb upstream 1.0kb upstream 4823 true Scaffold1595: 51644-56466 Capsella grandiflora
Cagra.1595s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1595: 55467-56466 Capsella grandiflora
Cagra.1595s0011 1.0kb downstream 1.0kb downstream 4823 true Scaffold1595: 50644-55466 Capsella grandiflora
Cagra.1595s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1595: 50644-51643 Capsella grandiflora
Cagra.1595s0011 2.0kb upstream 2.0kb upstream 5823 true Scaffold1595: 51644-57466 Capsella grandiflora
Cagra.1595s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1595: 55467-57466 Capsella grandiflora
Cagra.1595s0011 2.0kb downstream 2.0kb downstream 5823 true Scaffold1595: 49644-55466 Capsella grandiflora
Cagra.1595s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1595: 49644-51643 Capsella grandiflora
Cagra.1595s0011 5.0kb upstream 5.0kb upstream 8823 true Scaffold1595: 51644-60466 Capsella grandiflora
Cagra.1595s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1595: 55467-60466 Capsella grandiflora
Cagra.1595s0011 5.0kb downstream 5.0kb downstream 8823 true Scaffold1595: 46644-55466 Capsella grandiflora
Cagra.1595s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1595: 46644-51643 Capsella grandiflora
Cagra.1595s0011 10.0kb upstream 10.0kb upstream 13823 true Scaffold1595: 51644-65466 Capsella grandiflora
Cagra.1595s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1595: 55467-65466 Capsella grandiflora
Cagra.1595s0011 10.0kb downstream 10.0kb downstream 13823 true Scaffold1595: 41644-55466 Capsella grandiflora
Cagra.1595s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1595: 41644-51643 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376804 5261 Brassicaceae View MSA
123830507 5264 Brassicales-Malvales View MSA
124346494 5266 SBM View MSA
124244038 5268 Malvidae View MSA
124060770 5270 Rosid View MSA
123740006 5271 Pentapetalae View MSA
122797861 5272 Eudicot View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain