Gene : Glyma.09G035500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24423:SF563 - PHYTOCHROME E Genomic Order:  355
Name:  ? Glyma.09G035500 Secondary Identifier:  ? PAC:30483382
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G035500 0.5kb upstream 0.5kb upstream 7335 true Chr09: 2960395-2967729 Glycine max
Glyma.09G035500 0.5kb upstream 0.5kb upstream 500 false Chr09: 2967230-2967729 Glycine max
Glyma.09G035500 0.5kb downstream 0.5kb downstream 7335 true Chr09: 2959895-2967229 Glycine max
Glyma.09G035500 0.5kb downstream 0.5kb downstream 500 false Chr09: 2959895-2960394 Glycine max
Glyma.09G035500 1.0kb upstream 1.0kb upstream 7835 true Chr09: 2960395-2968229 Glycine max
Glyma.09G035500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2967230-2968229 Glycine max
Glyma.09G035500 1.0kb downstream 1.0kb downstream 7835 true Chr09: 2959395-2967229 Glycine max
Glyma.09G035500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2959395-2960394 Glycine max
Glyma.09G035500 2.0kb upstream 2.0kb upstream 8835 true Chr09: 2960395-2969229 Glycine max
Glyma.09G035500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2967230-2969229 Glycine max
Glyma.09G035500 2.0kb downstream 2.0kb downstream 8835 true Chr09: 2958395-2967229 Glycine max
Glyma.09G035500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2958395-2960394 Glycine max
Glyma.09G035500 5.0kb upstream 5.0kb upstream 11835 true Chr09: 2960395-2972229 Glycine max
Glyma.09G035500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2967230-2972229 Glycine max
Glyma.09G035500 5.0kb downstream 5.0kb downstream 11835 true Chr09: 2955395-2967229 Glycine max
Glyma.09G035500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2955395-2960394 Glycine max
Glyma.09G035500 10.0kb upstream 10.0kb upstream 16835 true Chr09: 2960395-2977229 Glycine max
Glyma.09G035500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2967230-2977229 Glycine max
Glyma.09G035500 10.0kb downstream 10.0kb downstream 16835 true Chr09: 2950395-2967229 Glycine max
Glyma.09G035500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2950395-2960394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308488 5265 Fabidae View MSA
124065248 5270 Rosid View MSA
123737518 5271 Pentapetalae View MSA
122797861 5272 Eudicot View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.21275 0.0 24.6742    
cufflinks 9.9987 0.0 26.8494    
cufflinks 8.97465 0.0 24.027    
cufflinks 10.946 0.0 29.5075    
cufflinks 8.465 0.0 22.6304    
cufflinks 4.3696 0.0 11.784   Low
cufflinks 21.3 0.0 60.7928   High
cufflinks 8.6932 0.0 23.2482    
cufflinks 8.06797 0.0 21.5497    
cufflinks 4.693        
cufflinks 2.223       Low
cufflinks 8.06     High  
cufflinks 3.499        
cufflinks 3.744        
cufflinks 3.424        
cufflinks 7.69     High  
cufflinks 1.351       Low
cufflinks 7.141        
cufflinks 9.239     High High
cufflinks 8.654     High High
cufflinks 2.151       Low
cufflinks 8.222     High High
cufflinks 4.249        
cufflinks 2.986        
cufflinks 8.564     High High
cufflinks 1.752       Low

0 Strain