Protein Family : phytochrome B 123737518

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  51

51 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29889.t000067 (1 of 1) K12121 - phytochrome B (PHYB) R. communis v0.1 6735   29889: 292112-298846
Cucsa.252520 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sativus v1.0 5590   scaffold02229: 1438440-1444029
orange1.1g037299m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. sinensis v1.1 6009   scaffold00016: 990517-996525
AT4G16250 (1 of 1) K12122 - phytochrome D (PHYD) A. thaliana TAIR10 PHYD 3885   Chr4: 9195602-9199486
AT2G18790 (1 of 1) K12121 - phytochrome B (PHYB) A. thaliana TAIR10 PHYB 4550   Chr2: 8139881-8144430
Thhalv10024253m.g (1 of 1) PF00360//PF00512//PF00989//PF01590//PF02518//PF08446 - Phytochrome region (PHY) // His Kinase A (phospho-acceptor) domain (HisKA) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_2) E. salsugineum v1.0 4230   scaffold_1: 10830637-10834866
Ciclev10004218m.g (1 of 2) PTHR24423:SF563 - PHYTOCHROME E C. clementina v1.0 6479   scaffold_9: 827118-833596
Lus10016911.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4396   scaffold153: 580863-585258
Lus10037771.g (1 of 5) PTHR24423:SF563 - PHYTOCHROME E L. usitatissimum v1.0 4373   scaffold196: 1468583-1472955
Gorai.011G200200 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E G. raimondii v2.1 5999   Chr11: 48430597-48436595
Thecc1EG021372 (1 of 1) K12121 - phytochrome B (PHYB) T. cacao v1.1 7351   scaffold_4: 32790761-32798111
Migut.N00041 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. guttatus v2.0 4751   scaffold_14: 180218-184968
Araha.17195s0001 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 4522   Scaffold17195: 38-4559
Araha.23460s0001 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E A. halleri v1.1 3925   Scaffold23460: 331-4255
Cagra.0389s0013 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 4563   Scaffold389: 48878-53440
Cagra.3528s0020 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E C. grandiflora v1.1 4380   Scaffold3528: 77812-82191
Glyma.09G035500 (1 of 4) PTHR24423:SF563 - PHYTOCHROME E G. max Wm82.a2.v1 6835   Chr09: 2960395-2967229
Glyma.15G140000 (1 of 4) PTHR24423:SF563 - PHYTOCHROME E G. max Wm82.a2.v1 7133   Chr15: 11435551-11442683
Brara.E02473 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E B. rapa FPsc v1.3 4450   A05: 22102673-22107122
Bostr.30275s0074 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E B. stricta v1.2 4433   Scaffold30275: 535831-540263
Bostr.18351s0345 (1 of 3) PTHR24423:SF563 - PHYTOCHROME E B. stricta v1.2 4654   Scaffold18351: 2825704-2830357
Medtr2g034040 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. truncatula Mt4.0v1 6953   chr2: 12986584-12993536
SapurV1A.0114s0100 (1 of 2) K12121 - phytochrome B (PHYB) S. purpurea v1.0 7919   chr08: 7206534-7214452
SapurV1A.0050s0370 (1 of 2) K12121 - phytochrome B (PHYB) S. purpurea v1.0 7117   chr10: 11384515-11391631
Eucgr.A00380 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E E. grandis v2.0 7564   Chr01: 6537312-6544875
Prupe.1G117000 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E P. persica v2.1 6000   Pp01: 9221269-9227268
Manes.03G205100 (1 of 2) PTHR24423:SF563 - PHYTOCHROME E M. esculenta v6.1 6564   Chromosome03: 28550453-28557016
Kalax.0391s0019 (1 of 6) PTHR24423:SF563 - PHYTOCHROME E K. laxiflora v1.1 7134   scaffold_391: 153412-160545
AL3G53130 (1 of 1) K12121 - phytochrome B (PHYB) A. lyrata v2.1 4583   scaffold_3: 23698491-23703073
AL7G38810 (1 of 1) K12122 - phytochrome D (PHYD) A. lyrata v2.1 4579   scaffold_7: 12253606-12258184

51 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g037299m C. sinensis v1.1 123737518 phytochrome B 1 5271 Pentapetalae
AT4G16250.1 A. thaliana TAIR10 123737518 phytochrome B 2 5271 Pentapetalae
Lus10037771 L. usitatissimum v1.0 123737518 phytochrome B 2 5271 Pentapetalae
Gorai.011G200200.1 G. raimondii v2.1 123737518 phytochrome B 1 5271 Pentapetalae
Thecc1EG021372t1 T. cacao v1.1 123737518 phytochrome B 1 5271 Pentapetalae
Migut.N00041.1.p M. guttatus v2.0 123737518 phytochrome B 1 5271 Pentapetalae
Glyma.09G035500.1.p G. max Wm82.a2.v1 123737518 phytochrome B 2 5271 Pentapetalae
Medtr2g034040.1 M. truncatula Mt4.0v1 123737518 phytochrome B 1 5271 Pentapetalae
SapurV1A.0050s0370.1.p S. purpurea v1.0 123737518 phytochrome B 2 5271 Pentapetalae
SapurV1A.0114s0100.1.p S. purpurea v1.0 123737518 phytochrome B 2 5271 Pentapetalae
Prupe.1G117000.1.p P. persica v2.1 123737518 phytochrome B 1 5271 Pentapetalae
Manes.03G205100.1.p M. esculenta v6.1 123737518 phytochrome B 1 5271 Pentapetalae
Kalax.0391s0019.1.p K. laxiflora v1.1 123737518 phytochrome B 1 5271 Pentapetalae
AUR62016209-RA C. quinoa v1.0 123737518 phytochrome B 2 5271 Pentapetalae
AUR62039279-RA C. quinoa v1.0 123737518 phytochrome B 2 5271 Pentapetalae
Phvul.006G118200.1.p P. vulgaris v2.1 123737518 phytochrome B 1 5271 Pentapetalae
Potri.010G145900.2.p P. trichocarpa v3.1 123737518 phytochrome B 2 5271 Pentapetalae
PGSC0003DMP400041531 S. tuberosum v4.03 123737518 phytochrome B 1 5271 Pentapetalae
Lsat_1_v5_gn_1_41100.1 L. sativa V8 123737518 phytochrome B 1 5271 Pentapetalae
Carub.0007s2528.1.p C. rubella v1.1 123737518 phytochrome B 2 5271 Pentapetalae
HanXRQChr01g0030991 H. annuus r1.2 123737518 phytochrome B 1 5271 Pentapetalae
29889.m003301 R. communis v0.1 123737518 phytochrome B 1 5271 Pentapetalae
Cucsa.252520.1 C. sativus v1.0 123737518 phytochrome B 1 5271 Pentapetalae
AT2G18790.1 A. thaliana TAIR10 123737518 phytochrome B 2 5271 Pentapetalae
Thhalv10024253m E. salsugineum v1.0 123737518 phytochrome B 1 5271 Pentapetalae
Ciclev10004218m C. clementina v1.0 123737518 phytochrome B 1 5271 Pentapetalae
Lus10016911 L. usitatissimum v1.0 123737518 phytochrome B 2 5271 Pentapetalae
Araha.17195s0001.1.p A. halleri v1.1 123737518 phytochrome B 2 5271 Pentapetalae
Araha.23460s0001.1.p A. halleri v1.1 123737518 phytochrome B 2 5271 Pentapetalae
Cagra.3528s0020.1.p C. grandiflora v1.1 123737518 phytochrome B 2 5271 Pentapetalae