Gene : Thecc1EG002400 T. cacao v1.1
Defline:  (1 of 1) PTHR24423:SF493 - PHYTOCHROME C Genomic Order:  1897
Name:  ? Thecc1EG002400 Secondary Identifier:  ? PAC:27432654
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002400 0.5kb upstream 0.5kb upstream 7610 true scaffold_1: 13649974-13657583 Theobroma cacao
Thecc1EG002400 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13657084-13657583 Theobroma cacao
Thecc1EG002400 0.5kb downstream 0.5kb downstream 7610 true scaffold_1: 13649474-13657083 Theobroma cacao
Thecc1EG002400 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13649474-13649973 Theobroma cacao
Thecc1EG002400 1.0kb upstream 1.0kb upstream 8110 true scaffold_1: 13649974-13658083 Theobroma cacao
Thecc1EG002400 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13657084-13658083 Theobroma cacao
Thecc1EG002400 1.0kb downstream 1.0kb downstream 8110 true scaffold_1: 13648974-13657083 Theobroma cacao
Thecc1EG002400 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13648974-13649973 Theobroma cacao
Thecc1EG002400 2.0kb upstream 2.0kb upstream 9110 true scaffold_1: 13649974-13659083 Theobroma cacao
Thecc1EG002400 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13657084-13659083 Theobroma cacao
Thecc1EG002400 2.0kb downstream 2.0kb downstream 9110 true scaffold_1: 13647974-13657083 Theobroma cacao
Thecc1EG002400 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13647974-13649973 Theobroma cacao
Thecc1EG002400 5.0kb upstream 5.0kb upstream 12110 true scaffold_1: 13649974-13662083 Theobroma cacao
Thecc1EG002400 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13657084-13662083 Theobroma cacao
Thecc1EG002400 5.0kb downstream 5.0kb downstream 12110 true scaffold_1: 13644974-13657083 Theobroma cacao
Thecc1EG002400 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13644974-13649973 Theobroma cacao
Thecc1EG002400 10.0kb upstream 10.0kb upstream 17110 true scaffold_1: 13649974-13667083 Theobroma cacao
Thecc1EG002400 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13657084-13667083 Theobroma cacao
Thecc1EG002400 10.0kb downstream 10.0kb downstream 17110 true scaffold_1: 13639974-13657083 Theobroma cacao
Thecc1EG002400 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13639974-13649973 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026532 5273 Angiosperm View MSA
123828347 5264 Brassicales-Malvales View MSA
124341283 5266 SBM View MSA
124244266 5268 Malvidae View MSA
124064325 5270 Rosid View MSA
123736969 5271 Pentapetalae View MSA
122790347 5272 Eudicot View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain