Protein Family : phytochrome C, putative, expressed 122026532

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  49

49 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.100300 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. sativus v1.0 5627   scaffold00926: 840316-845942
orange1.1g001215m.g (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. sinensis v1.1 5873   scaffold00859: 11941-17813
AT5G35840 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C A. thaliana TAIR10 PHYC 3939   Chr5: 14007826-14011764
Thhalv10003554m.g (1 of 1) PTHR24423:SF493 - PHYTOCHROME C E. salsugineum v1.0 3859   scaffold_6: 8744906-8748764
Ciclev10014096m.g (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. clementina v1.0 5798   scaffold_2: 24302053-24307850
Lus10006389.g (1 of 3) PTHR24423:SF493 - PHYTOCHROME C L. usitatissimum v1.0 3726   scaffold1603: 172560-176285
Lus10012342.g (1 of 3) PTHR24423:SF493 - PHYTOCHROME C L. usitatissimum v1.0 3683   scaffold572: 231900-235582
Gorai.007G166300 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C G. raimondii v2.1 16887   Chr07: 14686329-14703215
Thecc1EG002400 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C T. cacao v1.1 7110   scaffold_1: 13649974-13657083
Migut.H01285 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C M. guttatus v2.0 4626   scaffold_8: 15172018-15176643
Araha.5601s0001 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C A. halleri v1.1 3893   Scaffold5601: 1037-4929
Cagra.2324s0003 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C C. grandiflora v1.1 3674   Scaffold2324: 13344-17017
Brara.E01391 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C B. rapa FPsc v1.3 3862   A05: 8799546-8803407
Bostr.29044s0036 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C B. stricta v1.2 3945   Scaffold29044: 415580-419524
Traes_5BL_02F8B4BFF (1 of 3) PTHR24423:SF493 - PHYTOCHROME C T. aestivum v2.2 5519   ta_iwgsc_5bl_v1_10897570: 11434-16952
Eucgr.K03574 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C E. grandis v2.0 5981   Chr11: 44217054-44223034
Prupe.3G198200 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C P. persica v2.1 4685   Pp03: 20802080-20806764
GSMUA_Achr6G00080_001 (1 of 1) PF00360//PF00989//PF01590//PF02518//PF08446 - Phytochrome region (PHY) // PAS fold (PAS) // GAF domain (GAF) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_2) M. acuminata v1 4932   chr6: 54082-59013
Kalax.1377s0005 (1 of 2) PTHR24423:SF493 - PHYTOCHROME C K. laxiflora v1.1 6245   scaffold_1377: 34793-41037
Kalax.0095s0021 (1 of 2) PTHR24423:SF493 - PHYTOCHROME C K. laxiflora v1.1 6069   scaffold_95: 147548-153616
Seita.9G089700 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C S. italica v2.2 5386   scaffold_9: 5411575-5416960
Bradi1g08400 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C B. distachyon v3.1 5208   Bd1: 5923000-5928207
Aco004827 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C A. comosus v3 9879   LG07: 144178-154056
Aqcoe4G312000 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C A. coerulea v3.1 6312   Chr_04: 45641578-45647889
LOC_Os03g54084 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C O. sativa v7.0 5059   Chr3: 31004724-31009782
Kaladp0045s0526 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C K. fedtschenkoi v1.1 5781   Scaffold_45: 5346445-5352225
AL7G44720 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C A. lyrata v2.1 3882   scaffold_7: 18776287-18780168
DCAR_012892 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C D. carota v2.0 5150   DCARv2_Chr4: 34461130-34466279
Solyc07g045480.2 (1 of 1) PTHR24423:SF493 - PHYTOCHROME C S. lycopersicum ITAG2.4 10488   SL2.50ch07: 58611076-58621563
AUR62015008 (1 of 3) K12120 - phytochrome A (PHYA) C. quinoa v1.0 6890   C_Quinoa_Scaffold_2888: 2309676-2316565

49 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Migut.H01285.1.p M. guttatus v2.0 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
AL7G44720.t1 A. lyrata v2.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
PGSC0003DMP400030385 S. tuberosum v4.03 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Aco004827.1 A. comosus v3 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Aqcoe4G312000.1.p A. coerulea v3.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Pavir.2NG208400.1.p P. virgatum v4.1 122026532 phytochrome C, putative, expressed 3 5273 Angiosperm
Pavir.3KG524100.1.p P. virgatum v4.1 122026532 phytochrome C, putative, expressed 3 5273 Angiosperm
Pavir.9NG097800.1.p P. virgatum v4.1 122026532 phytochrome C, putative, expressed 3 5273 Angiosperm
LOC_Os03g54084.1 O. sativa v7.0 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Oeu046874.1 O. europaea v1.0 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
DCAR_012892 D. carota v2.0 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Solyc07g045480.2.1 S. lycopersicum ITAG2.4 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Sobic.001G087100.1.p S. bicolor v3.1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Lus10006389 L. usitatissimum v1.0 122026532 phytochrome C, putative, expressed 2 5273 Angiosperm
Lus10012342 L. usitatissimum v1.0 122026532 phytochrome C, putative, expressed 2 5273 Angiosperm
Araha.5601s0001.1.p A. halleri v1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
AUR62015008-RA C. quinoa v1.0 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
VIT_212s0057g00980.1 V. vinifera v2.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Cagra.2324s0003.1.p C. grandiflora v1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Brara.E01391.1.p B. rapa FPsc v1.3 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Bostr.29044s0036.1.p B. stricta v1.2 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
orange1.1g001215m C. sinensis v1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Carub.0007s3166.1.p C. rubella v1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Gorai.007G166300.1 G. raimondii v2.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
AT5G35840.1 A. thaliana TAIR10 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Traes_5BL_02F8B4BFF.1 T. aestivum v2.2 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Thecc1EG002400t1 T. cacao v1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Eucgr.K03574.1.p E. grandis v2.0 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
Prupe.3G198200.1.p P. persica v2.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm
MD09G1126400 M. domestica v1.1 122026532 phytochrome C, putative, expressed 1 5273 Angiosperm