Gene : Bradi1g65550 B. distachyon v3.1
Defline:  (1 of 1) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  8282
Name:  ? Bradi1g65550 Secondary Identifier:  ? PAC:32798978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g65550 0.5kb upstream 0.5kb upstream 2748 true Bd1: 64755697-64758444 Brachypodium distachyon
Bradi1g65550 0.5kb upstream 0.5kb upstream 500 false Bd1: 64757945-64758444 Brachypodium distachyon
Bradi1g65550 0.5kb downstream 0.5kb downstream 2748 true Bd1: 64755197-64757944 Brachypodium distachyon
Bradi1g65550 0.5kb downstream 0.5kb downstream 500 false Bd1: 64755197-64755696 Brachypodium distachyon
Bradi1g65550 1.0kb upstream 1.0kb upstream 3248 true Bd1: 64755697-64758944 Brachypodium distachyon
Bradi1g65550 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64757945-64758944 Brachypodium distachyon
Bradi1g65550 1.0kb downstream 1.0kb downstream 3248 true Bd1: 64754697-64757944 Brachypodium distachyon
Bradi1g65550 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64754697-64755696 Brachypodium distachyon
Bradi1g65550 2.0kb upstream 2.0kb upstream 4248 true Bd1: 64755697-64759944 Brachypodium distachyon
Bradi1g65550 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64757945-64759944 Brachypodium distachyon
Bradi1g65550 2.0kb downstream 2.0kb downstream 4248 true Bd1: 64753697-64757944 Brachypodium distachyon
Bradi1g65550 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64753697-64755696 Brachypodium distachyon
Bradi1g65550 5.0kb upstream 5.0kb upstream 7248 true Bd1: 64755697-64762944 Brachypodium distachyon
Bradi1g65550 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64757945-64762944 Brachypodium distachyon
Bradi1g65550 5.0kb downstream 5.0kb downstream 7248 true Bd1: 64750697-64757944 Brachypodium distachyon
Bradi1g65550 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64750697-64755696 Brachypodium distachyon
Bradi1g65550 10.0kb upstream 10.0kb upstream 12248 true Bd1: 64755697-64767944 Brachypodium distachyon
Bradi1g65550 10.0kb upstream 10.0kb upstream 10000 false Bd1: 64757945-64767944 Brachypodium distachyon
Bradi1g65550 10.0kb downstream 10.0kb downstream 12248 true Bd1: 64745697-64757944 Brachypodium distachyon
Bradi1g65550 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64745697-64755696 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589504 5269 Grass View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.483       High
cufflinks 3.22        
cufflinks 3.195        
cufflinks 3.386        
cufflinks 0.729        
cufflinks 3.134        
cufflinks 3.729        
cufflinks 3.357        
cufflinks 3.421        
cufflinks 3.432        
cufflinks 0.062     Low Low
cufflinks 1.974        
cufflinks 0.123       Low
cufflinks 0.102       Low
cufflinks 1.201        
cufflinks 4.01        
cufflinks 3.211        
cufflinks 0.88        
cufflinks 3.103        
cufflinks 0.247       Low
cufflinks 2.202        
cufflinks 3.965        
cufflinks 3.296        
cufflinks 2.862        
cufflinks 3.867        
cufflinks 3.183        
cufflinks 0.088     Low Low
cufflinks 3.727        
cufflinks 3.864        
cufflinks 4.217        

0 Strain