Gene : Bradi1g66130 B. distachyon v3.1
Defline:  (1 of 1) PTHR20938:SF0 - INTEGRATOR COMPLEX SUBUNIT 4-RELATED Genomic Order:  8355
Name:  ? Bradi1g66130 Secondary Identifier:  ? PAC:32792282
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g66130 0.5kb upstream 0.5kb upstream 7119 true Bd1: 65186068-65193186 Brachypodium distachyon
Bradi1g66130 0.5kb upstream 0.5kb upstream 500 false Bd1: 65186068-65186567 Brachypodium distachyon
Bradi1g66130 0.5kb downstream 0.5kb downstream 7119 true Bd1: 65186568-65193686 Brachypodium distachyon
Bradi1g66130 0.5kb downstream 0.5kb downstream 500 false Bd1: 65193187-65193686 Brachypodium distachyon
Bradi1g66130 1.0kb upstream 1.0kb upstream 7619 true Bd1: 65185568-65193186 Brachypodium distachyon
Bradi1g66130 1.0kb upstream 1.0kb upstream 1000 false Bd1: 65185568-65186567 Brachypodium distachyon
Bradi1g66130 1.0kb downstream 1.0kb downstream 7619 true Bd1: 65186568-65194186 Brachypodium distachyon
Bradi1g66130 1.0kb downstream 1.0kb downstream 1000 false Bd1: 65193187-65194186 Brachypodium distachyon
Bradi1g66130 2.0kb upstream 2.0kb upstream 8619 true Bd1: 65184568-65193186 Brachypodium distachyon
Bradi1g66130 2.0kb upstream 2.0kb upstream 2000 false Bd1: 65184568-65186567 Brachypodium distachyon
Bradi1g66130 2.0kb downstream 2.0kb downstream 8619 true Bd1: 65186568-65195186 Brachypodium distachyon
Bradi1g66130 2.0kb downstream 2.0kb downstream 2000 false Bd1: 65193187-65195186 Brachypodium distachyon
Bradi1g66130 5.0kb upstream 5.0kb upstream 11619 true Bd1: 65181568-65193186 Brachypodium distachyon
Bradi1g66130 5.0kb upstream 5.0kb upstream 5000 false Bd1: 65181568-65186567 Brachypodium distachyon
Bradi1g66130 5.0kb downstream 5.0kb downstream 11619 true Bd1: 65186568-65198186 Brachypodium distachyon
Bradi1g66130 5.0kb downstream 5.0kb downstream 5000 false Bd1: 65193187-65198186 Brachypodium distachyon
Bradi1g66130 10.0kb upstream 10.0kb upstream 16619 true Bd1: 65176568-65193186 Brachypodium distachyon
Bradi1g66130 10.0kb upstream 10.0kb upstream 10000 false Bd1: 65176568-65186567 Brachypodium distachyon
Bradi1g66130 10.0kb downstream 10.0kb downstream 16619 true Bd1: 65186568-65203186 Brachypodium distachyon
Bradi1g66130 10.0kb downstream 10.0kb downstream 10000 false Bd1: 65193187-65203186 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582333 5269 Grass View MSA
122048339 5273 Angiosperm View MSA
121350116 5274 Embryophyte View MSA
123381584 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low Low
cufflinks 0.364       High
cufflinks 0.278        
cufflinks 0.336        
cufflinks 0.052     Low Low
cufflinks 0.284        
cufflinks 0.277        
cufflinks 0.175        
cufflinks 0.251        
cufflinks 0.102     Low  
cufflinks 0.198        
cufflinks 0.237        
cufflinks 0.204        
cufflinks 0.156        
cufflinks 0.106        
cufflinks 0.22        
cufflinks 0.108     Low  
cufflinks 0.316        
cufflinks 0.151     Low  
cufflinks 0.05     Low Low
cufflinks 0.214        
cufflinks 0.22        
cufflinks 0.18        
cufflinks 0.238        
cufflinks 0.286        
cufflinks 0.258        
cufflinks 0.299        
cufflinks 0.239        
cufflinks 0.219        
cufflinks 0.288        

0 Strain