Gene : Bradi5g09380 B. distachyon v3.1
Defline:  (1 of 1) K02021 - putative ABC transport system ATP-binding protein (ABC.MR) Genomic Order:  956
Name:  ? Bradi5g09380 Secondary Identifier:  ? PAC:32809402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g09380 0.5kb upstream 0.5kb upstream 5180 true Bd5: 12775431-12780610 Brachypodium distachyon
Bradi5g09380 0.5kb upstream 0.5kb upstream 500 false Bd5: 12780111-12780610 Brachypodium distachyon
Bradi5g09380 0.5kb downstream 0.5kb downstream 5180 true Bd5: 12774931-12780110 Brachypodium distachyon
Bradi5g09380 0.5kb downstream 0.5kb downstream 500 false Bd5: 12774931-12775430 Brachypodium distachyon
Bradi5g09380 1.0kb upstream 1.0kb upstream 5680 true Bd5: 12775431-12781110 Brachypodium distachyon
Bradi5g09380 1.0kb upstream 1.0kb upstream 1000 false Bd5: 12780111-12781110 Brachypodium distachyon
Bradi5g09380 1.0kb downstream 1.0kb downstream 5680 true Bd5: 12774431-12780110 Brachypodium distachyon
Bradi5g09380 1.0kb downstream 1.0kb downstream 1000 false Bd5: 12774431-12775430 Brachypodium distachyon
Bradi5g09380 2.0kb upstream 2.0kb upstream 6680 true Bd5: 12775431-12782110 Brachypodium distachyon
Bradi5g09380 2.0kb upstream 2.0kb upstream 2000 false Bd5: 12780111-12782110 Brachypodium distachyon
Bradi5g09380 2.0kb downstream 2.0kb downstream 6680 true Bd5: 12773431-12780110 Brachypodium distachyon
Bradi5g09380 2.0kb downstream 2.0kb downstream 2000 false Bd5: 12773431-12775430 Brachypodium distachyon
Bradi5g09380 5.0kb upstream 5.0kb upstream 9680 true Bd5: 12775431-12785110 Brachypodium distachyon
Bradi5g09380 5.0kb upstream 5.0kb upstream 5000 false Bd5: 12780111-12785110 Brachypodium distachyon
Bradi5g09380 5.0kb downstream 5.0kb downstream 9680 true Bd5: 12770431-12780110 Brachypodium distachyon
Bradi5g09380 5.0kb downstream 5.0kb downstream 5000 false Bd5: 12770431-12775430 Brachypodium distachyon
Bradi5g09380 10.0kb upstream 10.0kb upstream 14680 true Bd5: 12775431-12790110 Brachypodium distachyon
Bradi5g09380 10.0kb upstream 10.0kb upstream 10000 false Bd5: 12780111-12790110 Brachypodium distachyon
Bradi5g09380 10.0kb downstream 10.0kb downstream 14680 true Bd5: 12765431-12780110 Brachypodium distachyon
Bradi5g09380 10.0kb downstream 10.0kb downstream 10000 false Bd5: 12765431-12775430 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583248 5269 Grass View MSA
122048026 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121344960 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.058     Low  
cufflinks 0.393       High
cufflinks 0.25       High
cufflinks 0.372       High
cufflinks 0.029     Low Low
cufflinks 0.175        
cufflinks 0.238       High
cufflinks 0.083        
cufflinks 0.112        
cufflinks 0.061     Low  
cufflinks 0.096        
cufflinks 0.116        
cufflinks 0.052     Low  
cufflinks 0.072        
cufflinks 0.061     Low  
cufflinks 0.156        
cufflinks 0.118     Low  
cufflinks 0.194        
cufflinks 0.089     Low  
cufflinks 0.009     Low Low
cufflinks 0.074     Low  
cufflinks 0.112     Low  
cufflinks 0.093        
cufflinks 0.104     Low  
cufflinks 0.207        
cufflinks 0.121        
cufflinks 0.048     Low  
cufflinks 0.129        
cufflinks 0.076     Low  
cufflinks 0.118     Low  

0 Strain