Gene : Bradi1g72620 B. distachyon v3.1
Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Genomic Order:  9170
Name:  ? Bradi1g72620 Secondary Identifier:  ? PAC:32792147
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g72620 0.5kb upstream 0.5kb upstream 4763 true Bd1: 70544131-70548893 Brachypodium distachyon
Bradi1g72620 0.5kb upstream 0.5kb upstream 500 false Bd1: 70544131-70544630 Brachypodium distachyon
Bradi1g72620 0.5kb downstream 0.5kb downstream 4763 true Bd1: 70544631-70549393 Brachypodium distachyon
Bradi1g72620 0.5kb downstream 0.5kb downstream 500 false Bd1: 70548894-70549393 Brachypodium distachyon
Bradi1g72620 1.0kb upstream 1.0kb upstream 5263 true Bd1: 70543631-70548893 Brachypodium distachyon
Bradi1g72620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 70543631-70544630 Brachypodium distachyon
Bradi1g72620 1.0kb downstream 1.0kb downstream 5263 true Bd1: 70544631-70549893 Brachypodium distachyon
Bradi1g72620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 70548894-70549893 Brachypodium distachyon
Bradi1g72620 2.0kb upstream 2.0kb upstream 6263 true Bd1: 70542631-70548893 Brachypodium distachyon
Bradi1g72620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 70542631-70544630 Brachypodium distachyon
Bradi1g72620 2.0kb downstream 2.0kb downstream 6263 true Bd1: 70544631-70550893 Brachypodium distachyon
Bradi1g72620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 70548894-70550893 Brachypodium distachyon
Bradi1g72620 5.0kb upstream 5.0kb upstream 9263 true Bd1: 70539631-70548893 Brachypodium distachyon
Bradi1g72620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 70539631-70544630 Brachypodium distachyon
Bradi1g72620 5.0kb downstream 5.0kb downstream 9263 true Bd1: 70544631-70553893 Brachypodium distachyon
Bradi1g72620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 70548894-70553893 Brachypodium distachyon
Bradi1g72620 10.0kb upstream 10.0kb upstream 14263 true Bd1: 70534631-70548893 Brachypodium distachyon
Bradi1g72620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 70534631-70544630 Brachypodium distachyon
Bradi1g72620 10.0kb downstream 10.0kb downstream 14263 true Bd1: 70544631-70558893 Brachypodium distachyon
Bradi1g72620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 70548894-70558893 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580398 5269 Grass View MSA
122046211 5273 Angiosperm View MSA
123429023 5275 Viridiplantae View MSA
121347340 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.109        
cufflinks 6.321        
cufflinks 7.579        
cufflinks 6.013        
cufflinks 4.542       Low
cufflinks 5.947        
cufflinks 5.737        
cufflinks 6.838        
cufflinks 6.135        
cufflinks 7.0        
cufflinks 6.788        
cufflinks 5.777        
cufflinks 5.98        
cufflinks 5.609        
cufflinks 5.442        
cufflinks 6.683        
cufflinks 5.325        
cufflinks 8.954       High
cufflinks 6.686        
cufflinks 7.522        
cufflinks 6.935        
cufflinks 7.461        
cufflinks 6.231        
cufflinks 5.858        
cufflinks 4.92       Low
cufflinks 8.273       High
cufflinks 7.496        
cufflinks 8.04       High
cufflinks 8.047       High
cufflinks 6.554        

0 Strain