Gene : Bradi1g74080 B. distachyon v3.1
Defline:  (1 of 2) PTHR13166:SF7 - LYR MOTIF-CONTAINING PROTEIN 4 Genomic Order:  9313
Name:  ? Bradi1g74080 Secondary Identifier:  ? PAC:32797708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g74080 0.5kb upstream 0.5kb upstream 3264 true Bd1: 71595194-71598457 Brachypodium distachyon
Bradi1g74080 0.5kb upstream 0.5kb upstream 500 false Bd1: 71595194-71595693 Brachypodium distachyon
Bradi1g74080 0.5kb downstream 0.5kb downstream 3264 true Bd1: 71595694-71598957 Brachypodium distachyon
Bradi1g74080 0.5kb downstream 0.5kb downstream 500 false Bd1: 71598458-71598957 Brachypodium distachyon
Bradi1g74080 1.0kb upstream 1.0kb upstream 3764 true Bd1: 71594694-71598457 Brachypodium distachyon
Bradi1g74080 1.0kb upstream 1.0kb upstream 1000 false Bd1: 71594694-71595693 Brachypodium distachyon
Bradi1g74080 1.0kb downstream 1.0kb downstream 3764 true Bd1: 71595694-71599457 Brachypodium distachyon
Bradi1g74080 1.0kb downstream 1.0kb downstream 1000 false Bd1: 71598458-71599457 Brachypodium distachyon
Bradi1g74080 2.0kb upstream 2.0kb upstream 4764 true Bd1: 71593694-71598457 Brachypodium distachyon
Bradi1g74080 2.0kb upstream 2.0kb upstream 2000 false Bd1: 71593694-71595693 Brachypodium distachyon
Bradi1g74080 2.0kb downstream 2.0kb downstream 4764 true Bd1: 71595694-71600457 Brachypodium distachyon
Bradi1g74080 2.0kb downstream 2.0kb downstream 2000 false Bd1: 71598458-71600457 Brachypodium distachyon
Bradi1g74080 5.0kb upstream 5.0kb upstream 7764 true Bd1: 71590694-71598457 Brachypodium distachyon
Bradi1g74080 5.0kb upstream 5.0kb upstream 5000 false Bd1: 71590694-71595693 Brachypodium distachyon
Bradi1g74080 5.0kb downstream 5.0kb downstream 7764 true Bd1: 71595694-71603457 Brachypodium distachyon
Bradi1g74080 5.0kb downstream 5.0kb downstream 5000 false Bd1: 71598458-71603457 Brachypodium distachyon
Bradi1g74080 10.0kb upstream 10.0kb upstream 12764 true Bd1: 71585694-71598457 Brachypodium distachyon
Bradi1g74080 10.0kb upstream 10.0kb upstream 10000 false Bd1: 71585694-71595693 Brachypodium distachyon
Bradi1g74080 10.0kb downstream 10.0kb downstream 12764 true Bd1: 71595694-71608457 Brachypodium distachyon
Bradi1g74080 10.0kb downstream 10.0kb downstream 10000 false Bd1: 71598458-71608457 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124480280 5269 Grass View MSA
122044575 5273 Angiosperm View MSA
121346889 5274 Embryophyte View MSA
123426954 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.666       High
cufflinks 4.031        
cufflinks 3.684        
cufflinks 5.161        
cufflinks 3.893        
cufflinks 3.492        
cufflinks 4.929        
cufflinks 4.027        
cufflinks 3.637        
cufflinks 5.445        
cufflinks 4.718        
cufflinks 2.268       Low
cufflinks 3.611        
cufflinks 4.676        
cufflinks 4.758        
cufflinks 3.82        
cufflinks 5.631        
cufflinks 3.157       Low
cufflinks 6.711       High
cufflinks 8.245       High
cufflinks 6.608       High
cufflinks 2.754       Low
cufflinks 4.621        
cufflinks 4.721        
cufflinks 4.947        
cufflinks 4.368        
cufflinks 3.422        
cufflinks 5.78        
cufflinks 4.257        
cufflinks 3.551        

0 Strain