Gene : Bradi1g69520 B. distachyon v3.1
Defline:  (1 of 1) K15305 - vacuole morphology and inheritance protein 14 (VAC14, TAX1BP2) Genomic Order:  8800
Name:  ? Bradi1g69520 Secondary Identifier:  ? PAC:32798996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g69520 0.5kb upstream 0.5kb upstream 10285 true Bd1: 68254073-68264357 Brachypodium distachyon
Bradi1g69520 0.5kb upstream 0.5kb upstream 500 false Bd1: 68254073-68254572 Brachypodium distachyon
Bradi1g69520 0.5kb downstream 0.5kb downstream 10285 true Bd1: 68254573-68264857 Brachypodium distachyon
Bradi1g69520 0.5kb downstream 0.5kb downstream 500 false Bd1: 68264358-68264857 Brachypodium distachyon
Bradi1g69520 1.0kb upstream 1.0kb upstream 10785 true Bd1: 68253573-68264357 Brachypodium distachyon
Bradi1g69520 1.0kb upstream 1.0kb upstream 1000 false Bd1: 68253573-68254572 Brachypodium distachyon
Bradi1g69520 1.0kb downstream 1.0kb downstream 10785 true Bd1: 68254573-68265357 Brachypodium distachyon
Bradi1g69520 1.0kb downstream 1.0kb downstream 1000 false Bd1: 68264358-68265357 Brachypodium distachyon
Bradi1g69520 2.0kb upstream 2.0kb upstream 11785 true Bd1: 68252573-68264357 Brachypodium distachyon
Bradi1g69520 2.0kb upstream 2.0kb upstream 2000 false Bd1: 68252573-68254572 Brachypodium distachyon
Bradi1g69520 2.0kb downstream 2.0kb downstream 11785 true Bd1: 68254573-68266357 Brachypodium distachyon
Bradi1g69520 2.0kb downstream 2.0kb downstream 2000 false Bd1: 68264358-68266357 Brachypodium distachyon
Bradi1g69520 5.0kb upstream 5.0kb upstream 14785 true Bd1: 68249573-68264357 Brachypodium distachyon
Bradi1g69520 5.0kb upstream 5.0kb upstream 5000 false Bd1: 68249573-68254572 Brachypodium distachyon
Bradi1g69520 5.0kb downstream 5.0kb downstream 14785 true Bd1: 68254573-68269357 Brachypodium distachyon
Bradi1g69520 5.0kb downstream 5.0kb downstream 5000 false Bd1: 68264358-68269357 Brachypodium distachyon
Bradi1g69520 10.0kb upstream 10.0kb upstream 19785 true Bd1: 68244573-68264357 Brachypodium distachyon
Bradi1g69520 10.0kb upstream 10.0kb upstream 10000 false Bd1: 68244573-68254572 Brachypodium distachyon
Bradi1g69520 10.0kb downstream 10.0kb downstream 19785 true Bd1: 68254573-68274357 Brachypodium distachyon
Bradi1g69520 10.0kb downstream 10.0kb downstream 10000 false Bd1: 68264358-68274357 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577234 5269 Grass View MSA
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.38        
cufflinks 5.01        
cufflinks 5.383        
cufflinks 4.402        
cufflinks 2.802       Low
cufflinks 4.699        
cufflinks 4.394        
cufflinks 4.247        
cufflinks 4.623        
cufflinks 4.103        
cufflinks 5.032        
cufflinks 4.533        
cufflinks 4.356        
cufflinks 3.856        
cufflinks 3.88        
cufflinks 4.631        
cufflinks 2.971        
cufflinks 6.866       High
cufflinks 3.098        
cufflinks 2.406       Low
cufflinks 3.286        
cufflinks 6.021       High
cufflinks 4.113        
cufflinks 4.185        
cufflinks 4.041        
cufflinks 5.466        
cufflinks 5.601        
cufflinks 5.014        
cufflinks 4.99        
cufflinks 4.253        

0 Strain