Gene : Bradi1g69980 B. distachyon v3.1
Defline:  (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  8857
Name:  ? Bradi1g69980 Secondary Identifier:  ? PAC:32805499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g69980 0.5kb upstream 0.5kb upstream 4152 true Bd1: 68671090-68675241 Brachypodium distachyon
Bradi1g69980 0.5kb upstream 0.5kb upstream 500 false Bd1: 68674742-68675241 Brachypodium distachyon
Bradi1g69980 0.5kb downstream 0.5kb downstream 4152 true Bd1: 68670590-68674741 Brachypodium distachyon
Bradi1g69980 0.5kb downstream 0.5kb downstream 500 false Bd1: 68670590-68671089 Brachypodium distachyon
Bradi1g69980 1.0kb upstream 1.0kb upstream 4652 true Bd1: 68671090-68675741 Brachypodium distachyon
Bradi1g69980 1.0kb upstream 1.0kb upstream 1000 false Bd1: 68674742-68675741 Brachypodium distachyon
Bradi1g69980 1.0kb downstream 1.0kb downstream 4652 true Bd1: 68670090-68674741 Brachypodium distachyon
Bradi1g69980 1.0kb downstream 1.0kb downstream 1000 false Bd1: 68670090-68671089 Brachypodium distachyon
Bradi1g69980 2.0kb upstream 2.0kb upstream 5652 true Bd1: 68671090-68676741 Brachypodium distachyon
Bradi1g69980 2.0kb upstream 2.0kb upstream 2000 false Bd1: 68674742-68676741 Brachypodium distachyon
Bradi1g69980 2.0kb downstream 2.0kb downstream 5652 true Bd1: 68669090-68674741 Brachypodium distachyon
Bradi1g69980 2.0kb downstream 2.0kb downstream 2000 false Bd1: 68669090-68671089 Brachypodium distachyon
Bradi1g69980 5.0kb upstream 5.0kb upstream 8652 true Bd1: 68671090-68679741 Brachypodium distachyon
Bradi1g69980 5.0kb upstream 5.0kb upstream 5000 false Bd1: 68674742-68679741 Brachypodium distachyon
Bradi1g69980 5.0kb downstream 5.0kb downstream 8652 true Bd1: 68666090-68674741 Brachypodium distachyon
Bradi1g69980 5.0kb downstream 5.0kb downstream 5000 false Bd1: 68666090-68671089 Brachypodium distachyon
Bradi1g69980 10.0kb upstream 10.0kb upstream 13652 true Bd1: 68671090-68684741 Brachypodium distachyon
Bradi1g69980 10.0kb upstream 10.0kb upstream 10000 false Bd1: 68674742-68684741 Brachypodium distachyon
Bradi1g69980 10.0kb downstream 10.0kb downstream 13652 true Bd1: 68661090-68674741 Brachypodium distachyon
Bradi1g69980 10.0kb downstream 10.0kb downstream 10000 false Bd1: 68661090-68671089 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573442 5269 Grass View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.963        
cufflinks 16.964     High  
cufflinks 13.658     High  
cufflinks 13.889     High  
cufflinks 1.667        
cufflinks 16.144     High  
cufflinks 13.693     High  
cufflinks 14.803     High  
cufflinks 17.781     High  
cufflinks 8.855        
cufflinks 0.015     Low Low
cufflinks 12.919     High  
cufflinks 0.103       Low
cufflinks 0.04     Low Low
cufflinks 2.033        
cufflinks 16.964     High  
cufflinks 10.622        
cufflinks 28.897     High  
cufflinks 3.388        
cufflinks 0.112     Low Low
cufflinks 8.587        
cufflinks 15.199     High  
cufflinks 8.676        
cufflinks 11.369     High  
cufflinks 13.252     High  
cufflinks 10.684        
cufflinks 0.047     Low Low
cufflinks 9.446        
cufflinks 11.68     High  
cufflinks 18.452     High  

0 Strain