Gene : Bradi1g70724 B. distachyon v3.1
Defline:  (1 of 5) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  7029
Name:  ? Bradi1g70724 Secondary Identifier:  ? PAC:32794611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g70724 0.5kb upstream 0.5kb upstream 1923 true Bd1: 54924375-54926297 Brachypodium distachyon
Bradi1g70724 0.5kb upstream 0.5kb upstream 500 false Bd1: 54925798-54926297 Brachypodium distachyon
Bradi1g70724 0.5kb downstream 0.5kb downstream 1923 true Bd1: 54923875-54925797 Brachypodium distachyon
Bradi1g70724 0.5kb downstream 0.5kb downstream 500 false Bd1: 54923875-54924374 Brachypodium distachyon
Bradi1g70724 1.0kb upstream 1.0kb upstream 2423 true Bd1: 54924375-54926797 Brachypodium distachyon
Bradi1g70724 1.0kb upstream 1.0kb upstream 1000 false Bd1: 54925798-54926797 Brachypodium distachyon
Bradi1g70724 1.0kb downstream 1.0kb downstream 2423 true Bd1: 54923375-54925797 Brachypodium distachyon
Bradi1g70724 1.0kb downstream 1.0kb downstream 1000 false Bd1: 54923375-54924374 Brachypodium distachyon
Bradi1g70724 2.0kb upstream 2.0kb upstream 3423 true Bd1: 54924375-54927797 Brachypodium distachyon
Bradi1g70724 2.0kb upstream 2.0kb upstream 2000 false Bd1: 54925798-54927797 Brachypodium distachyon
Bradi1g70724 2.0kb downstream 2.0kb downstream 3423 true Bd1: 54922375-54925797 Brachypodium distachyon
Bradi1g70724 2.0kb downstream 2.0kb downstream 2000 false Bd1: 54922375-54924374 Brachypodium distachyon
Bradi1g70724 5.0kb upstream 5.0kb upstream 6423 true Bd1: 54924375-54930797 Brachypodium distachyon
Bradi1g70724 5.0kb upstream 5.0kb upstream 5000 false Bd1: 54925798-54930797 Brachypodium distachyon
Bradi1g70724 5.0kb downstream 5.0kb downstream 6423 true Bd1: 54919375-54925797 Brachypodium distachyon
Bradi1g70724 5.0kb downstream 5.0kb downstream 5000 false Bd1: 54919375-54924374 Brachypodium distachyon
Bradi1g70724 10.0kb upstream 10.0kb upstream 11423 true Bd1: 54924375-54935797 Brachypodium distachyon
Bradi1g70724 10.0kb upstream 10.0kb upstream 10000 false Bd1: 54925798-54935797 Brachypodium distachyon
Bradi1g70724 10.0kb downstream 10.0kb downstream 11423 true Bd1: 54914375-54925797 Brachypodium distachyon
Bradi1g70724 10.0kb downstream 10.0kb downstream 10000 false Bd1: 54914375-54924374 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591124 5269 Grass View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.01     Low  
cufflinks 0.02     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain