Gene : Bradi1g77690 B. distachyon v3.1
Defline:  (1 of 1) PTHR21641 - TRANSLATION INITIATION FACTOR-RELATED Genomic Order:  9751
Name:  ? Bradi1g77690 Secondary Identifier:  ? PAC:32798441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g77690 0.5kb upstream 0.5kb upstream 3100 true Bd1: 74146888-74149987 Brachypodium distachyon
Bradi1g77690 0.5kb upstream 0.5kb upstream 500 false Bd1: 74149488-74149987 Brachypodium distachyon
Bradi1g77690 0.5kb downstream 0.5kb downstream 3100 true Bd1: 74146388-74149487 Brachypodium distachyon
Bradi1g77690 0.5kb downstream 0.5kb downstream 500 false Bd1: 74146388-74146887 Brachypodium distachyon
Bradi1g77690 1.0kb upstream 1.0kb upstream 3600 true Bd1: 74146888-74150487 Brachypodium distachyon
Bradi1g77690 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74149488-74150487 Brachypodium distachyon
Bradi1g77690 1.0kb downstream 1.0kb downstream 3600 true Bd1: 74145888-74149487 Brachypodium distachyon
Bradi1g77690 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74145888-74146887 Brachypodium distachyon
Bradi1g77690 2.0kb upstream 2.0kb upstream 4600 true Bd1: 74146888-74151487 Brachypodium distachyon
Bradi1g77690 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74149488-74151487 Brachypodium distachyon
Bradi1g77690 2.0kb downstream 2.0kb downstream 4600 true Bd1: 74144888-74149487 Brachypodium distachyon
Bradi1g77690 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74144888-74146887 Brachypodium distachyon
Bradi1g77690 5.0kb upstream 5.0kb upstream 7600 true Bd1: 74146888-74154487 Brachypodium distachyon
Bradi1g77690 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74149488-74154487 Brachypodium distachyon
Bradi1g77690 5.0kb downstream 5.0kb downstream 7600 true Bd1: 74141888-74149487 Brachypodium distachyon
Bradi1g77690 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74141888-74146887 Brachypodium distachyon
Bradi1g77690 10.0kb upstream 10.0kb upstream 12600 true Bd1: 74146888-74159487 Brachypodium distachyon
Bradi1g77690 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74149488-74159487 Brachypodium distachyon
Bradi1g77690 10.0kb downstream 10.0kb downstream 12600 true Bd1: 74136888-74149487 Brachypodium distachyon
Bradi1g77690 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74136888-74146887 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590577 5269 Grass View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.152       High
cufflinks 2.143        
cufflinks 1.68        
cufflinks 2.553        
cufflinks 2.099        
cufflinks 2.152        
cufflinks 2.212        
cufflinks 1.868        
cufflinks 2.143        
cufflinks 2.057        
cufflinks 0.909       Low
cufflinks 1.459        
cufflinks 0.53       Low
cufflinks 0.834       Low
cufflinks 1.724        
cufflinks 1.896        
cufflinks 2.258        
cufflinks 2.974        
cufflinks 3.816       High
cufflinks 0.958       Low
cufflinks 3.04        
cufflinks 1.269        
cufflinks 1.807        
cufflinks 1.923        
cufflinks 2.674        
cufflinks 1.822        
cufflinks 0.656       Low
cufflinks 1.627        
cufflinks 1.287        
cufflinks 2.182        

0 Strain