Gene : Bradi1g78550 B. distachyon v3.1
Defline:  (1 of 2) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX Genomic Order:  9865
Name:  ? Bradi1g78550 Secondary Identifier:  ? PAC:32794664
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78550 0.5kb upstream 0.5kb upstream 23454 true Bd1: 74723427-74746880 Brachypodium distachyon
Bradi1g78550 0.5kb upstream 0.5kb upstream 500 false Bd1: 74723427-74723926 Brachypodium distachyon
Bradi1g78550 0.5kb downstream 0.5kb downstream 23454 true Bd1: 74723927-74747380 Brachypodium distachyon
Bradi1g78550 0.5kb downstream 0.5kb downstream 500 false Bd1: 74746881-74747380 Brachypodium distachyon
Bradi1g78550 1.0kb upstream 1.0kb upstream 23954 true Bd1: 74722927-74746880 Brachypodium distachyon
Bradi1g78550 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74722927-74723926 Brachypodium distachyon
Bradi1g78550 1.0kb downstream 1.0kb downstream 23954 true Bd1: 74723927-74747880 Brachypodium distachyon
Bradi1g78550 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74746881-74747880 Brachypodium distachyon
Bradi1g78550 2.0kb upstream 2.0kb upstream 24954 true Bd1: 74721927-74746880 Brachypodium distachyon
Bradi1g78550 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74721927-74723926 Brachypodium distachyon
Bradi1g78550 2.0kb downstream 2.0kb downstream 24954 true Bd1: 74723927-74748880 Brachypodium distachyon
Bradi1g78550 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74746881-74748880 Brachypodium distachyon
Bradi1g78550 5.0kb upstream 5.0kb upstream 27954 true Bd1: 74718927-74746880 Brachypodium distachyon
Bradi1g78550 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74718927-74723926 Brachypodium distachyon
Bradi1g78550 5.0kb downstream 5.0kb downstream 27954 true Bd1: 74723927-74751880 Brachypodium distachyon
Bradi1g78550 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74746881-74751880 Brachypodium distachyon
Bradi1g78550 10.0kb upstream 10.0kb upstream 32954 true Bd1: 74713927-74746880 Brachypodium distachyon
Bradi1g78550 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74713927-74723926 Brachypodium distachyon
Bradi1g78550 10.0kb downstream 10.0kb downstream 32954 true Bd1: 74723927-74756880 Brachypodium distachyon
Bradi1g78550 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74746881-74756880 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585691 5269 Grass View MSA
122047484 5273 Angiosperm View MSA
121349285 5274 Embryophyte View MSA
123428109 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.335        
cufflinks 1.175       High
cufflinks 0.98        
cufflinks 0.679        
cufflinks 0.147       Low
cufflinks 0.932        
cufflinks 0.908        
cufflinks 0.634        
cufflinks 0.928        
cufflinks 0.363        
cufflinks 0.811        
cufflinks 0.907        
cufflinks 0.604        
cufflinks 0.509        
cufflinks 0.207       Low
cufflinks 0.87        
cufflinks 0.258        
cufflinks 1.206       High
cufflinks 0.467        
cufflinks 0.126     Low Low
cufflinks 0.284        
cufflinks 1.065        
cufflinks 0.65        
cufflinks 0.633        
cufflinks 0.587        
cufflinks 0.849        
cufflinks 0.601        
cufflinks 0.826        
cufflinks 0.784        
cufflinks 0.717        

0 Strain