Protein Family : CCR4-Not complex component, Not1domain containing protein, expressed 122047484

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  90

90 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30174.t000208 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) R. communis v0.1 18085   30174: 416713-434797
Cucsa.259830 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. sativus v1.0 26686   scaffold02229: 6159267-6185952
orange1.1g000072m.g (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. sinensis v1.1 20707   scaffold00001: 842316-863022
AT1G02080 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) A. thaliana TAIR10 13513   Chr1: 373335-386847
Thhalv10006521m.g (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX E. salsugineum v1.0 13943   scaffold_5: 15596368-15610310
Ciclev10018430m.g (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. clementina v1.0 20692   scaffold_3: 50144424-50165115
Lus10028176.g (1 of 3) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 L. usitatissimum v1.0 15307   scaffold327: 356062-371368
Lus10024660.g (1 of 3) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 L. usitatissimum v1.0 14619   scaffold349: 606320-620938
Lus10042876.g (1 of 1) PF04054//PF12842 - CCR4-Not complex component, Not1 (Not1) // Domain of unknown function (DUF3819) (DUF3819) L. usitatissimum v1.0 7992   scaffold67: 2559288-2567279
Gorai.008G107100 (1 of 1) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 G. raimondii v2.1 16887   Chr08: 33590368-33607254
Thecc1EG005611 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) T. cacao v1.1 18370   scaffold_1: 37433162-37451531
Thecc1EG014910 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) T. cacao v1.1 20627   scaffold_3: 25081963-25102589
Migut.B01578 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX M. guttatus v2.0 22120   scaffold_2: 17279965-17302084
Araha.3702s0016 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX A. halleri v1.1 13636   Scaffold3702: 46072-59707
Cagra.1968s0143 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. grandiflora v1.1 13616   Scaffold1968: 486527-500142
Glyma.07G108700 (1 of 2) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 G. max Wm82.a2.v1 20213   Chr07: 10680718-10700930
Glyma.03G118400 (1 of 2) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 G. max Wm82.a2.v1 20880   Chr03: 32894436-32915315
Glyma.03G118200 (1 of 1) KOG1831 - Negative regulator of transcription G. max Wm82.a2.v1 14866   Chr03: 32856852-32871717
Brara.G01553 (1 of 4) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. rapa FPsc v1.3 12893   A07: 15471147-15484039
Brara.J00008 (1 of 4) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. rapa FPsc v1.3 13120   A10: 45267-58386
Brara.I05615 (1 of 4) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. rapa FPsc v1.3 13870   A09: 44764578-44778447
Bostr.5325s0130 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. stricta v1.2 13767   Scaffold5325: 623006-636772
Medtr8g005820 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX M. truncatula Mt4.0v1 21503   chr8: 333342-354844
SapurV1A.0382s0210 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) S. purpurea v1.0 19573   chr14: 4175201-4194773
SapurV1A.0033s0370 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) S. purpurea v1.0 20441   chr02: 11726515-11746955
evm_27.TU.AmTr_v1.0_scaffold00106.104 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX A. trichopoda v1.0 43402   AmTr_v1.0_scaffold00106: 1850765-1894166
Traes_1AL_7E06C6672 (1 of 4) PF04054//PF12842//PF16415//PF16417//PF16418 - CCR4-Not complex component, Not1 (Not1) // Domain of unknown function (DUF3819) (DUF3819) // CCR4-NOT transcription complex subunit 1 CAF1-binding domain (CNOT1_CAF1_bind) // CCR4-NOT transcription complex subunit 1 TTP binding domain (CNOT1_TTP_bind) // CCR4-NOT transcription complex subunit 1 HEAT repeat (CNOT1_HEAT) T. aestivum v2.2 20674   ta_iwgsc_1al_v2_3958009: 1701-22374
Traes_1BL_257D144A8 (1 of 4) PF04054//PF12842//PF16415//PF16417//PF16418 - CCR4-Not complex component, Not1 (Not1) // Domain of unknown function (DUF3819) (DUF3819) // CCR4-NOT transcription complex subunit 1 CAF1-binding domain (CNOT1_CAF1_bind) // CCR4-NOT transcription complex subunit 1 TTP binding domain (CNOT1_TTP_bind) // CCR4-NOT transcription complex subunit 1 HEAT repeat (CNOT1_HEAT) T. aestivum v2.2 20435   ta_iwgsc_1bl_v1_3882181: 953-21387
Traes_4BL_FC0FBFF7E (1 of 4) PF04054//PF12842//PF16415//PF16417//PF16418 - CCR4-Not complex component, Not1 (Not1) // Domain of unknown function (DUF3819) (DUF3819) // CCR4-NOT transcription complex subunit 1 CAF1-binding domain (CNOT1_CAF1_bind) // CCR4-NOT transcription complex subunit 1 TTP binding domain (CNOT1_TTP_bind) // CCR4-NOT transcription complex subunit 1 HEAT repeat (CNOT1_HEAT) T. aestivum v2.2 18241   ta_iwgsc_4bl_v1_7032805: 8209-26449
Traes_5AL_C97D8329F (1 of 4) PF04054//PF12842//PF16415//PF16417//PF16418 - CCR4-Not complex component, Not1 (Not1) // Domain of unknown function (DUF3819) (DUF3819) // CCR4-NOT transcription complex subunit 1 CAF1-binding domain (CNOT1_CAF1_bind) // CCR4-NOT transcription complex subunit 1 TTP binding domain (CNOT1_TTP_bind) // CCR4-NOT transcription complex subunit 1 HEAT repeat (CNOT1_HEAT) T. aestivum v2.2 18082   ta_iwgsc_5al_v1_2739906: 554-18635

90 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30174.m008811 R. communis v0.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
AT1G02080.1 A. thaliana TAIR10 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
Thecc1EG014910t1 T. cacao v1.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Glyma.03G118400.1.p G. max Wm82.a2.v1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 3 5273 Angiosperm
Glyma.03G118200.1.p G. max Wm82.a2.v1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 3 5273 Angiosperm
Brara.G01553.1.p B. rapa FPsc v1.3 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 3 5273 Angiosperm
Brara.I05615.1.p B. rapa FPsc v1.3 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 3 5273 Angiosperm
Bostr.5325s0130.1.p B. stricta v1.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
Medtr8g005820.1 M. truncatula Mt4.0v1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
SapurV1A.0033s0370.1.p S. purpurea v1.0 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00106.104 A. trichopoda v1.0 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
Traes_1BL_257D144A8.1 T. aestivum v2.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 4 5273 Angiosperm
Traes_1AL_7E06C6672.2 T. aestivum v2.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 4 5273 Angiosperm
Traes_4BL_FC0FBFF7E.1 T. aestivum v2.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 4 5273 Angiosperm
Traes_5AL_C97D8329F.1 T. aestivum v2.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 4 5273 Angiosperm
Eucgr.E01609.1.p E. grandis v2.0 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
GSMUA_Achr11P04450_001 M. acuminata v1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
Manes.05G050200.1.p M. esculenta v6.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Kalax.0092s0109.1.p K. laxiflora v1.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Kalax.0639s0009.1.p K. laxiflora v1.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Seita.9G325500.1.p S. italica v2.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Seita.9G577600.1.p S. italica v2.2 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Bradi1g78550.1.p B. distachyon v3.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Bradi3g33190.2.p B. distachyon v3.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Brast03G196000.1.p B. stacei v1.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Brast02G001700.1.p B. stacei v1.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Aco024104.1 A. comosus v3 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 1 5273 Angiosperm
Aqcoe6G268700.1.p A. coerulea v3.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
Aqcoe7G084600.1.p A. coerulea v3.1 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm
LOC_Os10g40780.1 O. sativa v7.0 122047484 CCR4-Not complex component, Not1domain containing protein, expressed 2 5273 Angiosperm