Gene : Cagra.1968s0143 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX Genomic Order:  143
Name:  ? Cagra.1968s0143 Secondary Identifier:  ? PAC:28910082
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0143 0.5kb upstream 0.5kb upstream 14116 true Scaffold1968: 486027-500142 Capsella grandiflora
Cagra.1968s0143 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 486027-486526 Capsella grandiflora
Cagra.1968s0143 0.5kb downstream 0.5kb downstream 14116 true Scaffold1968: 486527-500642 Capsella grandiflora
Cagra.1968s0143 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 500143-500642 Capsella grandiflora
Cagra.1968s0143 1.0kb upstream 1.0kb upstream 14616 true Scaffold1968: 485527-500142 Capsella grandiflora
Cagra.1968s0143 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 485527-486526 Capsella grandiflora
Cagra.1968s0143 1.0kb downstream 1.0kb downstream 14616 true Scaffold1968: 486527-501142 Capsella grandiflora
Cagra.1968s0143 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 500143-501142 Capsella grandiflora
Cagra.1968s0143 2.0kb upstream 2.0kb upstream 15616 true Scaffold1968: 484527-500142 Capsella grandiflora
Cagra.1968s0143 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 484527-486526 Capsella grandiflora
Cagra.1968s0143 2.0kb downstream 2.0kb downstream 15616 true Scaffold1968: 486527-502142 Capsella grandiflora
Cagra.1968s0143 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 500143-502142 Capsella grandiflora
Cagra.1968s0143 5.0kb upstream 5.0kb upstream 18616 true Scaffold1968: 481527-500142 Capsella grandiflora
Cagra.1968s0143 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 481527-486526 Capsella grandiflora
Cagra.1968s0143 5.0kb downstream 5.0kb downstream 18616 true Scaffold1968: 486527-505142 Capsella grandiflora
Cagra.1968s0143 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 500143-505142 Capsella grandiflora
Cagra.1968s0143 10.0kb upstream 10.0kb upstream 23616 true Scaffold1968: 476527-500142 Capsella grandiflora
Cagra.1968s0143 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 476527-486526 Capsella grandiflora
Cagra.1968s0143 10.0kb downstream 10.0kb downstream 23616 true Scaffold1968: 486527-510142 Capsella grandiflora
Cagra.1968s0143 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 500143-510142 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366932 5261 Brassicaceae View MSA
123829794 5264 Brassicales-Malvales View MSA
124344718 5266 SBM View MSA
124248797 5268 Malvidae View MSA
124065277 5270 Rosid View MSA
123750174 5271 Pentapetalae View MSA
122790781 5272 Eudicot View MSA
122047484 5273 Angiosperm View MSA
121349285 5274 Embryophyte View MSA
123428109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain