Protein Family : transcription regulators 124065277

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  39

39 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30174.t000208 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) R. communis v0.1 18085   30174: 416713-434797
Cucsa.259830 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. sativus v1.0 26686   scaffold02229: 6159267-6185952
orange1.1g000072m.g (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. sinensis v1.1 20707   scaffold00001: 842316-863022
AT1G02080 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) A. thaliana TAIR10 13513   Chr1: 373335-386847
Thhalv10006521m.g (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX E. salsugineum v1.0 13943   scaffold_5: 15596368-15610310
Ciclev10018430m.g (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. clementina v1.0 20692   scaffold_3: 50144424-50165115
Lus10028176.g (1 of 3) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 L. usitatissimum v1.0 15307   scaffold327: 356062-371368
Lus10024660.g (1 of 3) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 L. usitatissimum v1.0 14619   scaffold349: 606320-620938
Gorai.008G107100 (1 of 1) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 G. raimondii v2.1 16887   Chr08: 33590368-33607254
Thecc1EG005611 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) T. cacao v1.1 18370   scaffold_1: 37433162-37451531
Thecc1EG014910 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) T. cacao v1.1 20627   scaffold_3: 25081963-25102589
Araha.3702s0016 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX A. halleri v1.1 13636   Scaffold3702: 46072-59707
Cagra.1968s0143 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX C. grandiflora v1.1 13616   Scaffold1968: 486527-500142
Glyma.07G108700 (1 of 2) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 G. max Wm82.a2.v1 20213   Chr07: 10680718-10700930
Glyma.03G118400 (1 of 2) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 G. max Wm82.a2.v1 20880   Chr03: 32894436-32915315
Brara.G01553 (1 of 4) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. rapa FPsc v1.3 12893   A07: 15471147-15484039
Brara.J00008 (1 of 4) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. rapa FPsc v1.3 13120   A10: 45267-58386
Brara.I05615 (1 of 4) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. rapa FPsc v1.3 13870   A09: 44764578-44778447
Bostr.5325s0130 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX B. stricta v1.2 13767   Scaffold5325: 623006-636772
Medtr8g005820 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX M. truncatula Mt4.0v1 21503   chr8: 333342-354844
SapurV1A.0382s0210 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) S. purpurea v1.0 19573   chr14: 4175201-4194773
SapurV1A.0033s0370 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) S. purpurea v1.0 20441   chr02: 11726515-11746955
Eucgr.E01609 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX E. grandis v2.0 27156   Chr05: 18056553-18083708
Prupe.2G135900 (1 of 1) PTHR13162 - CCR4-NOT TRANSCRIPTION COMPLEX P. persica v2.1 19488   Pp02: 19351255-19370742
Manes.05G050200 (1 of 1) PTHR13162:SF8 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 M. esculenta v6.1 22611   Chromosome05: 3729809-3752419
Manes.01G270100 (1 of 1) PTHR13162//PTHR13162:SF9 - CCR4-NOT TRANSCRIPTION COMPLEX M. esculenta v6.1 18066   Chromosome01: 34354684-34372749
AL1G10200 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) A. lyrata v2.1 13594   scaffold_1: 58726-72319
Tp57577_TGAC_v2_gene28734 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) T. pratense v2 23354   Tp57577_TGAC_v2_LG5: 9310677-9334030
Phvul.010G056800 (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) P. vulgaris v2.1 21785   Chr10: 8916737-8938521
Potri.002G143000 (1 of 2) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) P. trichocarpa v3.1 20887   Chr02: 10615296-10636182

39 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30174.m008811 R. communis v0.1 124065277 transcription regulators 1 5270 Rosid
AT1G02080.1 A. thaliana TAIR10 124065277 transcription regulators 1 5270 Rosid
Thecc1EG014910t1 T. cacao v1.1 124065277 transcription regulators 2 5270 Rosid
Araha.3702s0016.1.p A. halleri v1.1 124065277 transcription regulators 1 5270 Rosid
Glyma.03G118400.1.p G. max Wm82.a2.v1 124065277 transcription regulators 2 5270 Rosid
Brara.G01553.1.p B. rapa FPsc v1.3 124065277 transcription regulators 3 5270 Rosid
Brara.I05615.1.p B. rapa FPsc v1.3 124065277 transcription regulators 3 5270 Rosid
Bostr.5325s0130.1.p B. stricta v1.2 124065277 transcription regulators 1 5270 Rosid
Medtr8g005820.1 M. truncatula Mt4.0v1 124065277 transcription regulators 1 5270 Rosid
Eucgr.E01609.1.p E. grandis v2.0 124065277 transcription regulators 1 5270 Rosid
Manes.05G050200.1.p M. esculenta v6.1 124065277 transcription regulators 2 5270 Rosid
Phvul.010G056800.1.p P. vulgaris v2.1 124065277 transcription regulators 1 5270 Rosid
Potri.014G058800.1.p P. trichocarpa v3.1 124065277 transcription regulators 2 5270 Rosid
Podel.14G062800.1.p P. deltoides WV94 v2.1 124065277 transcription regulators 2 5270 Rosid
Podel.02G156700.1.p P. deltoides WV94 v2.1 124065277 transcription regulators 2 5270 Rosid
gene04794-v2.0.a2-hybrid.t3 F. vesca v2.0.a2 124065277 transcription regulators 1 5270 Rosid
Cucsa.259830.1 C. sativus v1.0 124065277 transcription regulators 1 5270 Rosid
orange1.1g000072m C. sinensis v1.1 124065277 transcription regulators 1 5270 Rosid
Thhalv10006521m E. salsugineum v1.0 124065277 transcription regulators 1 5270 Rosid
Ciclev10018430m C. clementina v1.0 124065277 transcription regulators 1 5270 Rosid
Lus10024660 L. usitatissimum v1.0 124065277 transcription regulators 2 5270 Rosid
Lus10028176 L. usitatissimum v1.0 124065277 transcription regulators 2 5270 Rosid
Gorai.008G107100.1 G. raimondii v2.1 124065277 transcription regulators 1 5270 Rosid
Thecc1EG005611t1 T. cacao v1.1 124065277 transcription regulators 2 5270 Rosid
Cagra.1968s0143.1.p C. grandiflora v1.1 124065277 transcription regulators 1 5270 Rosid
Glyma.07G108700.1.p G. max Wm82.a2.v1 124065277 transcription regulators 2 5270 Rosid
Brara.J00008.1.p B. rapa FPsc v1.3 124065277 transcription regulators 3 5270 Rosid
SapurV1A.0033s0370.1.p S. purpurea v1.0 124065277 transcription regulators 2 5270 Rosid
SapurV1A.0382s0210.1.p S. purpurea v1.0 124065277 transcription regulators 2 5270 Rosid
Prupe.2G135900.1.p P. persica v2.1 124065277 transcription regulators 1 5270 Rosid