Gene : AT1G02080 A. thaliana TAIR10
Defline:  (1 of 1) K12604 - CCR4-NOT transcription complex subunit 1 (CNOT1, NOT1) Genomic Order:  114
Name:  ? AT1G02080 Secondary Identifier:  ? PAC:19649687
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G02080 0.5kb upstream 0.5kb upstream 14013 true Chr1: 372835-386847 Arabidopsis thaliana
AT1G02080 0.5kb upstream 0.5kb upstream 500 false Chr1: 372835-373334 Arabidopsis thaliana
AT1G02080 0.5kb downstream 0.5kb downstream 14013 true Chr1: 373335-387347 Arabidopsis thaliana
AT1G02080 0.5kb downstream 0.5kb downstream 500 false Chr1: 386848-387347 Arabidopsis thaliana
AT1G02080 1.0kb upstream 1.0kb upstream 14513 true Chr1: 372335-386847 Arabidopsis thaliana
AT1G02080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 372335-373334 Arabidopsis thaliana
AT1G02080 1.0kb downstream 1.0kb downstream 14513 true Chr1: 373335-387847 Arabidopsis thaliana
AT1G02080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 386848-387847 Arabidopsis thaliana
AT1G02080 2.0kb upstream 2.0kb upstream 15513 true Chr1: 371335-386847 Arabidopsis thaliana
AT1G02080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 371335-373334 Arabidopsis thaliana
AT1G02080 2.0kb downstream 2.0kb downstream 15513 true Chr1: 373335-388847 Arabidopsis thaliana
AT1G02080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 386848-388847 Arabidopsis thaliana
AT1G02080 5.0kb upstream 5.0kb upstream 18513 true Chr1: 368335-386847 Arabidopsis thaliana
AT1G02080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 368335-373334 Arabidopsis thaliana
AT1G02080 5.0kb downstream 5.0kb downstream 18513 true Chr1: 373335-391847 Arabidopsis thaliana
AT1G02080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 386848-391847 Arabidopsis thaliana
AT1G02080 10.0kb upstream 10.0kb upstream 23513 true Chr1: 363335-386847 Arabidopsis thaliana
AT1G02080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 363335-373334 Arabidopsis thaliana
AT1G02080 10.0kb downstream 10.0kb downstream 23513 true Chr1: 373335-396847 Arabidopsis thaliana
AT1G02080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 386848-396847 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366932 5261 Brassicaceae View MSA
123829794 5264 Brassicales-Malvales View MSA
124344718 5266 SBM View MSA
124248797 5268 Malvidae View MSA
124065277 5270 Rosid View MSA
123750174 5271 Pentapetalae View MSA
122790781 5272 Eudicot View MSA
122047484 5273 Angiosperm View MSA
121349285 5274 Embryophyte View MSA
123428109 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.463        
cufflinks 9.086        
cufflinks 5.275       Low
cufflinks 10.114       High
cufflinks 5.616        
cufflinks 9.995        

0 Strain