Gene : Bradi1g78577 B. distachyon v3.1
Defline:  (1 of 1) PTHR24093:SF333 - ATPASE 5, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  9868
Name:  ? Bradi1g78577 Secondary Identifier:  ? PAC:32804804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78577 0.5kb upstream 0.5kb upstream 10615 true Bd1: 74762075-74772689 Brachypodium distachyon
Bradi1g78577 0.5kb upstream 0.5kb upstream 500 false Bd1: 74772190-74772689 Brachypodium distachyon
Bradi1g78577 0.5kb downstream 0.5kb downstream 10615 true Bd1: 74761575-74772189 Brachypodium distachyon
Bradi1g78577 0.5kb downstream 0.5kb downstream 500 false Bd1: 74761575-74762074 Brachypodium distachyon
Bradi1g78577 1.0kb upstream 1.0kb upstream 11115 true Bd1: 74762075-74773189 Brachypodium distachyon
Bradi1g78577 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74772190-74773189 Brachypodium distachyon
Bradi1g78577 1.0kb downstream 1.0kb downstream 11115 true Bd1: 74761075-74772189 Brachypodium distachyon
Bradi1g78577 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74761075-74762074 Brachypodium distachyon
Bradi1g78577 2.0kb upstream 2.0kb upstream 12115 true Bd1: 74762075-74774189 Brachypodium distachyon
Bradi1g78577 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74772190-74774189 Brachypodium distachyon
Bradi1g78577 2.0kb downstream 2.0kb downstream 12115 true Bd1: 74760075-74772189 Brachypodium distachyon
Bradi1g78577 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74760075-74762074 Brachypodium distachyon
Bradi1g78577 5.0kb upstream 5.0kb upstream 15115 true Bd1: 74762075-74777189 Brachypodium distachyon
Bradi1g78577 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74772190-74777189 Brachypodium distachyon
Bradi1g78577 5.0kb downstream 5.0kb downstream 15115 true Bd1: 74757075-74772189 Brachypodium distachyon
Bradi1g78577 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74757075-74762074 Brachypodium distachyon
Bradi1g78577 10.0kb upstream 10.0kb upstream 20115 true Bd1: 74762075-74782189 Brachypodium distachyon
Bradi1g78577 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74772190-74782189 Brachypodium distachyon
Bradi1g78577 10.0kb downstream 10.0kb downstream 20115 true Bd1: 74752075-74772189 Brachypodium distachyon
Bradi1g78577 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74752075-74762074 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575392 5269 Grass View MSA
122049671 5273 Angiosperm View MSA
121311532 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.725        
cufflinks 1.461       High
cufflinks 1.505       High
cufflinks 1.022        
cufflinks 0.649       Low
cufflinks 1.263        
cufflinks 1.156        
cufflinks 0.952        
cufflinks 1.219        
cufflinks 0.86        
cufflinks 1.236        
cufflinks 1.072        
cufflinks 0.983        
cufflinks 0.725        
cufflinks 0.713        
cufflinks 1.368        
cufflinks 0.641       Low
cufflinks 1.624       High
cufflinks 0.927        
cufflinks 0.493       Low
cufflinks 0.649       Low
cufflinks 1.513       High
cufflinks 0.953        
cufflinks 0.975        
cufflinks 1.053        
cufflinks 1.338        
cufflinks 1.009        
cufflinks 1.376        
cufflinks 1.348        
cufflinks 1.052        

0 Strain