Gene : Bradi1g74850 B. distachyon v3.1
Defline:  (1 of 1) PTHR21600 - RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B Genomic Order:  9402
Name:  ? Bradi1g74850 Secondary Identifier:  ? PAC:32799469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g74850 0.5kb upstream 0.5kb upstream 4785 true Bd1: 72146277-72151061 Brachypodium distachyon
Bradi1g74850 0.5kb upstream 0.5kb upstream 500 false Bd1: 72150562-72151061 Brachypodium distachyon
Bradi1g74850 0.5kb downstream 0.5kb downstream 4785 true Bd1: 72145777-72150561 Brachypodium distachyon
Bradi1g74850 0.5kb downstream 0.5kb downstream 500 false Bd1: 72145777-72146276 Brachypodium distachyon
Bradi1g74850 1.0kb upstream 1.0kb upstream 5285 true Bd1: 72146277-72151561 Brachypodium distachyon
Bradi1g74850 1.0kb upstream 1.0kb upstream 1000 false Bd1: 72150562-72151561 Brachypodium distachyon
Bradi1g74850 1.0kb downstream 1.0kb downstream 5285 true Bd1: 72145277-72150561 Brachypodium distachyon
Bradi1g74850 1.0kb downstream 1.0kb downstream 1000 false Bd1: 72145277-72146276 Brachypodium distachyon
Bradi1g74850 2.0kb upstream 2.0kb upstream 6285 true Bd1: 72146277-72152561 Brachypodium distachyon
Bradi1g74850 2.0kb upstream 2.0kb upstream 2000 false Bd1: 72150562-72152561 Brachypodium distachyon
Bradi1g74850 2.0kb downstream 2.0kb downstream 6285 true Bd1: 72144277-72150561 Brachypodium distachyon
Bradi1g74850 2.0kb downstream 2.0kb downstream 2000 false Bd1: 72144277-72146276 Brachypodium distachyon
Bradi1g74850 5.0kb upstream 5.0kb upstream 9285 true Bd1: 72146277-72155561 Brachypodium distachyon
Bradi1g74850 5.0kb upstream 5.0kb upstream 5000 false Bd1: 72150562-72155561 Brachypodium distachyon
Bradi1g74850 5.0kb downstream 5.0kb downstream 9285 true Bd1: 72141277-72150561 Brachypodium distachyon
Bradi1g74850 5.0kb downstream 5.0kb downstream 5000 false Bd1: 72141277-72146276 Brachypodium distachyon
Bradi1g74850 10.0kb upstream 10.0kb upstream 14285 true Bd1: 72146277-72160561 Brachypodium distachyon
Bradi1g74850 10.0kb upstream 10.0kb upstream 10000 false Bd1: 72150562-72160561 Brachypodium distachyon
Bradi1g74850 10.0kb downstream 10.0kb downstream 14285 true Bd1: 72136277-72150561 Brachypodium distachyon
Bradi1g74850 10.0kb downstream 10.0kb downstream 10000 false Bd1: 72136277-72146276 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572815 5269 Grass View MSA
122046867 5273 Angiosperm View MSA
121350601 5274 Embryophyte View MSA
123427017 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.038     High  
cufflinks 27.242     High  
cufflinks 29.164     High High
cufflinks 24.21     High  
cufflinks 6.499       Low
cufflinks 22.135     High  
cufflinks 25.686     High  
cufflinks 13.079     High  
cufflinks 16.172     High  
cufflinks 15.059     High  
cufflinks 21.31     High  
cufflinks 14.791     High  
cufflinks 16.09     High  
cufflinks 17.908     High  
cufflinks 8.668     High  
cufflinks 24.481     High  
cufflinks 16.378     High  
cufflinks 3.608       Low
cufflinks 19.244     High  
cufflinks 2.162       Low
cufflinks 12.504     High  
cufflinks 19.488     High  
cufflinks 12.87     High  
cufflinks 17.091     High  
cufflinks 22.073     High  
cufflinks 26.171     High  
cufflinks 18.729     High  
cufflinks 22.913     High  
cufflinks 19.784     High  
cufflinks 15.263     High  

0 Strain