Gene : Bradi2g03487 B. distachyon v3.1
Genomic Order:  453 Name:  ? Bradi2g03487
Secondary Identifier:  ? PAC:32779169
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g03487 0.5kb upstream 0.5kb upstream 5662 true Bd2: 2560468-2566129 Brachypodium distachyon
Bradi2g03487 0.5kb upstream 0.5kb upstream 500 false Bd2: 2565630-2566129 Brachypodium distachyon
Bradi2g03487 0.5kb downstream 0.5kb downstream 5662 true Bd2: 2559968-2565629 Brachypodium distachyon
Bradi2g03487 0.5kb downstream 0.5kb downstream 500 false Bd2: 2559968-2560467 Brachypodium distachyon
Bradi2g03487 1.0kb upstream 1.0kb upstream 6162 true Bd2: 2560468-2566629 Brachypodium distachyon
Bradi2g03487 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2565630-2566629 Brachypodium distachyon
Bradi2g03487 1.0kb downstream 1.0kb downstream 6162 true Bd2: 2559468-2565629 Brachypodium distachyon
Bradi2g03487 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2559468-2560467 Brachypodium distachyon
Bradi2g03487 2.0kb upstream 2.0kb upstream 7162 true Bd2: 2560468-2567629 Brachypodium distachyon
Bradi2g03487 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2565630-2567629 Brachypodium distachyon
Bradi2g03487 2.0kb downstream 2.0kb downstream 7162 true Bd2: 2558468-2565629 Brachypodium distachyon
Bradi2g03487 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2558468-2560467 Brachypodium distachyon
Bradi2g03487 5.0kb upstream 5.0kb upstream 10162 true Bd2: 2560468-2570629 Brachypodium distachyon
Bradi2g03487 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2565630-2570629 Brachypodium distachyon
Bradi2g03487 5.0kb downstream 5.0kb downstream 10162 true Bd2: 2555468-2565629 Brachypodium distachyon
Bradi2g03487 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2555468-2560467 Brachypodium distachyon
Bradi2g03487 10.0kb upstream 10.0kb upstream 15162 true Bd2: 2560468-2575629 Brachypodium distachyon
Bradi2g03487 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2565630-2575629 Brachypodium distachyon
Bradi2g03487 10.0kb downstream 10.0kb downstream 15162 true Bd2: 2550468-2565629 Brachypodium distachyon
Bradi2g03487 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2550468-2560467 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026491 5273 Angiosperm View MSA
124581024 5269 Grass View MSA
121346018 5274 Embryophyte View MSA
123380308 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167       Low
cufflinks 0.612        
cufflinks 0.569        
cufflinks 0.446        
cufflinks 0.171       Low
cufflinks 0.62        
cufflinks 0.591        
cufflinks 0.553        
cufflinks 0.688        
cufflinks 0.299        
cufflinks 0.689        
cufflinks 0.495        
cufflinks 0.688        
cufflinks 0.58        
cufflinks 0.3        
cufflinks 0.661        
cufflinks 0.311        
cufflinks 0.771        
cufflinks 0.261        
cufflinks 0.07     Low Low
cufflinks 0.363        
cufflinks 0.657        
cufflinks 0.516        
cufflinks 0.501        
cufflinks 0.463        
cufflinks 0.549        
cufflinks 0.81       High
cufflinks 0.485        
cufflinks 0.53        
cufflinks 0.499        

0 Strain