Gene : Bradi5g04550 B. distachyon v3.1
Defline:  (1 of 1) 5.3.99.3 - Prostaglandin-E synthase / Prostaglandin-H(2) E-isomerase Genomic Order:  512
Name:  ? Bradi5g04550 Secondary Identifier:  ? PAC:32807016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g04550 0.5kb upstream 0.5kb upstream 6293 true Bd5: 5755292-5761584 Brachypodium distachyon
Bradi5g04550 0.5kb upstream 0.5kb upstream 500 false Bd5: 5755292-5755791 Brachypodium distachyon
Bradi5g04550 0.5kb downstream 0.5kb downstream 6293 true Bd5: 5755792-5762084 Brachypodium distachyon
Bradi5g04550 0.5kb downstream 0.5kb downstream 500 false Bd5: 5761585-5762084 Brachypodium distachyon
Bradi5g04550 1.0kb upstream 1.0kb upstream 6793 true Bd5: 5754792-5761584 Brachypodium distachyon
Bradi5g04550 1.0kb upstream 1.0kb upstream 1000 false Bd5: 5754792-5755791 Brachypodium distachyon
Bradi5g04550 1.0kb downstream 1.0kb downstream 6793 true Bd5: 5755792-5762584 Brachypodium distachyon
Bradi5g04550 1.0kb downstream 1.0kb downstream 1000 false Bd5: 5761585-5762584 Brachypodium distachyon
Bradi5g04550 2.0kb upstream 2.0kb upstream 7793 true Bd5: 5753792-5761584 Brachypodium distachyon
Bradi5g04550 2.0kb upstream 2.0kb upstream 2000 false Bd5: 5753792-5755791 Brachypodium distachyon
Bradi5g04550 2.0kb downstream 2.0kb downstream 7793 true Bd5: 5755792-5763584 Brachypodium distachyon
Bradi5g04550 2.0kb downstream 2.0kb downstream 2000 false Bd5: 5761585-5763584 Brachypodium distachyon
Bradi5g04550 5.0kb upstream 5.0kb upstream 10793 true Bd5: 5750792-5761584 Brachypodium distachyon
Bradi5g04550 5.0kb upstream 5.0kb upstream 5000 false Bd5: 5750792-5755791 Brachypodium distachyon
Bradi5g04550 5.0kb downstream 5.0kb downstream 10793 true Bd5: 5755792-5766584 Brachypodium distachyon
Bradi5g04550 5.0kb downstream 5.0kb downstream 5000 false Bd5: 5761585-5766584 Brachypodium distachyon
Bradi5g04550 10.0kb upstream 10.0kb upstream 15793 true Bd5: 5745792-5761584 Brachypodium distachyon
Bradi5g04550 10.0kb upstream 10.0kb upstream 10000 false Bd5: 5745792-5755791 Brachypodium distachyon
Bradi5g04550 10.0kb downstream 10.0kb downstream 15793 true Bd5: 5755792-5771584 Brachypodium distachyon
Bradi5g04550 10.0kb downstream 10.0kb downstream 10000 false Bd5: 5761585-5771584 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572914 5269 Grass View MSA
122047627 5273 Angiosperm View MSA
121345509 5274 Embryophyte View MSA
123427606 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.271        
cufflinks 7.339        
cufflinks 6.286        
cufflinks 8.743        
cufflinks 5.112       Low
cufflinks 5.814        
cufflinks 5.967        
cufflinks 5.79        
cufflinks 5.714        
cufflinks 9.106       High
cufflinks 4.745       Low
cufflinks 4.877       Low
cufflinks 4.36       Low
cufflinks 4.901       Low
cufflinks 5.027       Low
cufflinks 6.057        
cufflinks 8.997       High
cufflinks 8.994       High
cufflinks 9.965       High
cufflinks 10.416       High
cufflinks 10.372       High
cufflinks 6.132        
cufflinks 5.961        
cufflinks 5.849        
cufflinks 6.824        
cufflinks 7.942        
cufflinks 5.9        
cufflinks 7.269        
cufflinks 7.585        
cufflinks 7.256        

0 Strain